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@article{LeHoux2021OpenImpala,
title = {{OpenImpala}: {OPEN} source {IMage} based {PArallisable} {Linear} {Algebra} solver},
author = {Le Houx, James and Kramer, Denis},
year = {2021},
journal = {SoftwareX},
volume = {15},
pages = {100729},
doi = {10.1016/j.softx.2021.100729},
issn = {2352-7110}
}
@article{le2023statistical,
title = {Statistical Effective Diffusivity Estimation in Porous Media Using an Integrated On-site Imaging Workflow for Synchrotron Users},
author = {Le Houx, James and Ruiz, Siul and McKay Fletcher, Daniel and Ahmed, Sharif and Roose, Tiina},
journal = {Transport in Porous Media},
volume = {150},
number = {1},
pages = {71--88},
year = {2023},
publisher = {Springer},
doi = {10.1007/s11242-023-01993-7}
}
@article{amrex2019,
title = {{AMReX}: a framework for block-structured adaptive mesh refinement},
author = {Zhang, Weiqun and Almgren, Ann and Beckner, Vince and Bell, John and Blaschke, Johannes and Chan, Cy and Day, Marcus and Friesen, Brian and Gott, Kevin and Graves, Daniel and others},
journal = {Journal of Open Source Software},
volume = {4},
number = {37},
pages = {1370},
year = {2019},
doi = {10.21105/joss.01370}
}
@article{sulzer2021python,
title = {{Python Battery Mathematical Modelling (PyBaMM)}},
author = {Sulzer, Valentin and Marquis, Scott G and Timms, Robert and Robinson, Martin and Chapman, S Jon},
journal = {Journal of Open Research Software},
volume = {9},
number = {1},
year = {2021},
publisher = {Ubiquity Press},
doi = {10.5334/jors.309}
}
@inproceedings{falgout2002hypre,
title = {hypre: A library of high performance preconditioners},
author = {Falgout, Robert D and Yang, Ulrike Meier},
booktitle = {International Conference on Computational Science},
pages = {632--641},
year = {2002},
organization = {Springer},
doi = {10.1007/3-540-47789-6_66}
}
@misc{jakob2017pybind11,
author = {Wenzel Jakob and Jason Rhinelander and Dean Moldovan},
year = {2017},
title = {pybind11 -- Seamless operability between {C}++11 and {Python}},
url = {https://github.com/pybind/pybind11}
}
@article{cooper2016taufactor,
title = {{TauFactor}: An open-source application for calculating tortuosity factors from tomographic data},
author = {Cooper, Samuel J and Bertei, Antonio and Shearing, Paul R and Kilner, John A and Brandon, Nigel P},
journal = {SoftwareX},
volume = {5},
pages = {203--210},
year = {2016},
publisher = {Elsevier},
doi = {10.1016/j.softx.2016.09.002}
}
@article{gostick2019porespy,
title = {{PoreSpy}: A {Python} Toolkit for Quantitative Analysis of Porous Media Images},
author = {Gostick, Jeff T and Khan, Zohaib A and Tranter, Thomas G and Kok, Matthew D R and Agnaou, Mehrez and Sadeghi, Mohammadamin and Jervis, Rhodri},
journal = {Journal of Open Source Software},
volume = {4},
number = {37},
pages = {1296},
year = {2019},
doi = {10.21105/joss.01296}
}
@article{ferguson2018puma,
title = {{PuMA}: the Porous Microstructure Analysis software},
author = {Ferguson, Joseph C and Panerai, Francesco and Borner, Arnaud and Mansour, Nagi N},
journal = {SoftwareX},
volume = {7},
pages = {81--87},
year = {2018},
publisher = {Elsevier},
doi = {10.1016/j.softx.2018.03.001}
}
@article{lu2025immersed,
title = {An immersed interface Adaptive Mesh Refinement algorithm for {Li}-ion battery simulations. {II}. Multi-dimensional extension and separator modeling},
author = {Lu, Jiawei and Nikiforakis, Nikolaos and Gokhale, Nandan},
journal = {Journal of Applied Physics},
volume = {138},
number = {4},
pages = {045002},
year = {2025},
publisher = {AIP Publishing},
doi = {10.1063/5.0281626}
}
@article{tjaden2016origin,
title = {On the origin and application of the {Bruggeman} correlation for analysing transport phenomena in electrochemical systems},
author = {Tjaden, Bernhard and Cooper, Samuel J and Brett, Daniel JL and Kramer, Denis and Shearing, Paul R},
journal = {Current Opinion in Chemical Engineering},
volume = {12},
pages = {44--51},
year = {2016},
publisher = {Elsevier},
doi = {10.1016/j.coche.2016.02.006}
}
@article{epstein1989tortuosity,
title = {On tortuosity and the tortuosity factor in flow and diffusion through porous media},
author = {Epstein, Norman},
journal = {Chemical Engineering Science},
volume = {44},
number = {3},
pages = {777--779},
year = {1989},
publisher = {Elsevier},
doi = {10.1016/0009-2509(89)85053-5}
}
@article{withers2021xray,
title = {X-ray computed tomography},
author = {Withers, Philip J and Bouman, Charles and Carmignato, Simone and Cnudde, Veerle and Grimaldi, David and Hagen, Charlotte K and Maire, Eric and Manber, Mariam and Martini, Fabrizio and Stock, Stuart R},
journal = {Nature Reviews Methods Primers},
volume = {1},
number = {1},
pages = {18},
year = {2021},
publisher = {Nature Publishing Group},
doi = {10.1038/s43586-021-00015-4}
}