_config.yml

# Book settings
# Learn more at https://jupyterbook.org/customize/config.html

title: Data Science with Python Jupyter book
author: CBBL teaching
logo: figures/FCTE.png

# Force re-execution of notebooks on each build.
# See https://jupyterbook.org/content/execute.html
execute:
  execute_notebooks: cache

# Define the name of the latex output file for PDF builds
latex:
  latex_documents:
    targetname: book.tex

# Add a bibtex file so that we can create citations
bibtex_bibfiles: code/code.bib

# Information about where the book exists on the web
repository:
  url: https://github.com/Biocomputing-Teaching/Data-Science-with-Python  # Online location of your book
  path_to_book: docs  # Optional path to your book, relative to the repository root
  branch: master  # Which branch of the repository should be used when creating links (optional)

# Add GitHub buttons to your book
# See https://jupyterbook.org/customize/config.html#add-a-link-to-your-repository
html:
  use_issues_button: true
  use_repository_button: true

# By default MathJax version 2 is currently used. We use here version 3, 
# which claims to improve load speeds by 60 - 80%:
sphinx:
  config:
    mathjax_path: https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js

parse:
  myst_enable_extensions:
    # don't forget to list any other extensions you want enabled,
    # including those that are enabled by default!
    - amsmath
    - dollarmath

only_build_toc_files: true
# exclude_patterns: [code/Untitled.ipynb,code/riskfolio.ipynb,LaTeX/README.md]