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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -100,6 +100,7 @@ cd test;./MiSeqCampylobacterAssembly.sh
100100
101101Contig sequence stats
102102--------------------------------------------------------------------------------
103+
103104Metric|Value
104105-----|-----
105106Mean (nt)|10476.89
@@ -115,12 +116,12 @@ N20|64969
115116N50|41436
116117N80|17465
117118
118- Size Range|bases|sequences
119+ Size Range (bp) |bases|sequences
119120-----|-----|-----
120- 100000 or more|119107|1
121- 10000-100000|1951445|63
122121200-1000|36330|119
1231221000-10000|145649|32
123+ 10000-100000|1951445|63
124+ 100000 or more|119107|1
124125
125126<pre >
126127./ssake_v3.8.5/tools/makeFastaFileFromScaffolds.pl run2014.scaffolds
@@ -129,6 +130,7 @@ Size Range|bases|sequences
129130
130131Scaffold sequence stats
131132--------------------------------------------------------------------------------
133+
132134Metric|Value
133135-----|-----
134136Mean (nt)|14931.05
@@ -144,12 +146,12 @@ N20|227805
144146N50|124387
145147N80|59173
146148
147- Size Range|bases|sequences
149+ Size Range (bp) |bases|sequences
148150-----|-----|-----
149- 100000 or more|1350704|8
150- 10000-100000|805378|18
151151200-1000|33684|113
1521521000-10000|63291|12
153+ 10000-100000|805378|18
154+ 100000 or more|1350704|8
153155
154156
155157### What's new in v3.7+ ?
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