cleanup

Author: warrenlr

python/software.py

@@ -9,13 +9,13 @@
 from collections import defaultdict
 
 # HTML elements
-TD_START = '<td style="vertical-align:top; padding:6px; word-break:break-word; overflow-wrap:anywhere;">'
+TD_START_BASE = 'style="vertical-align:top; padding:6px; word-break:break-word; overflow-wrap:anywhere;"'
 START = '<img class="software-logo" src="assets/logos/'
 P1 = '"><span class="software-title" style="white-space:nowrap;">'
 P2 = ' <a href="'
 P3 = '"><img class="git" src="assets/githubicon.svg"></a></span>'
 
-# Install block styling (key fix here)
+# Install block styling
 DIV_START = '<div style="text-align:center; margin-top:4px;">'
 LINE_STYLE = 'style="font-size:12px; font-family:monospace; height:18px; line-height:18px; white-space:nowrap;"'
 
@@ -25,18 +25,17 @@
 
 DIV_END = '</div>'
 
-P4 = '<p style="padding-top:4px; margin:0;">'
+# Bold description
+P4 = '<p style="padding-top:4px; margin:0; font-weight:bold;">'
 END = '</p></td>'
 
 def line(icon, text):
-    """Return a fixed-height line"""
     if text:
         return f'<div {LINE_STYLE}>{icon} {text}</div>'
     else:
         return f'<div {LINE_STYLE}>&nbsp;</div>'
 
 def downloads(lin, bio, dock):
-    """Aligned 3-line install block"""
     return (
         DIV_START +
         line(LINUXBREW_ICON, lin) +
@@ -47,10 +46,8 @@ def downloads(lin, bio, dock):
 
 
 def write_html(softwareblurbs_path):
-    """Write the software-content.html file with aligned layout"""
     categories = defaultdict(list)
 
-    # Read tools
     for my_file in sorted(glob.glob("*.txt")):
         with open(my_file, 'r') as fin:
             lines = [line.strip() for line in fin.readlines()]
@@ -62,13 +59,19 @@ def write_html(softwareblurbs_path):
             logofile, name, github, linuxbrew, bioconda, docker, desc, category = lines[:8]
             categories[category].append((logofile, name, github, linuxbrew, bioconda, docker, desc))
 
-    # Write HTML
     with open(os.path.join(softwareblurbs_path, "../_includes/software-content.html"), "w+") as software:
 
+        # Add hover + row separator styles once
+        software.write('''
+<style>
+td.software-cell:hover { background-color:#F5F9FF; cursor:pointer; }
+tr.software-row { border-bottom:1px solid #E5E5E5; }
+</style>
+''')
+
         software.write('<table style="width:100%; table-layout:fixed; border-collapse:collapse;">\n')
 
         for category in sorted(categories.keys()):
-            # Header
             software.write(
                 '<tr>'
                 '<td colspan="3" style="background-color:#DCEEFF; '
@@ -83,7 +86,10 @@ def write_html(softwareblurbs_path):
                 logofile, name, github, linuxbrew, bioconda, docker, desc = tool
 
                 if i % 3 == 0:
-                    software.write("<tr>\n")
+                    software.write('<tr class="software-row">\n')
+
+                # ✅ Clickable cell via onclick (no nested <a> issue)
+                TD_START = f'<td class="software-cell" onclick="window.open(\'{github}\', \'_blank\')" {TD_START_BASE}>'
 
                 html = (
                     TD_START +
@@ -99,7 +105,6 @@ def write_html(softwareblurbs_path):
 
                 i += 1
 
-            # Pad last row
             if i % 3 != 0:
                 remaining = 3 - (i % 3)
                 for _ in range(remaining):
@@ -112,7 +117,6 @@ def write_html(softwareblurbs_path):
 
 
 def main():
-    """Generate the birollab.ca software html"""
     if len(sys.argv[1:]) != 1:
         print("Usage:", sys.argv[0], "<Full path to softwareblurbs directory>")
         sys.exit()