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ask_question tool returns 'Repository not found' for indexed repositories #5

@abc57911

Description

@abc57911

Bug Description

The ask_question and read_wiki_contents tools return "Repository not found" error for repositories that are already indexed on DeepWiki.com (e.g., ArduPilot/ardupilot at https://deepwiki.com/ArduPilot/ardupilot).

However, the read_wiki_structure tool works correctly and returns the full wiki structure for the same repository.

Steps to Reproduce

  1. Index a repository (e.g., ArduPilot/ardupilot) on DeepWiki.com
  2. Try to call ask_question tool with that repository
  3. Error: "Repository not found. Visit https://deepwiki.com to index it."

Expected Behavior

Both ask_question and read_wiki_structure should work for indexed repositories.

Environment

Test Results

Tool Status
read_wiki_structure ✅ Works
ask_question ❌ Repository not found
read_wiki_contents ❌ Repository not found

Possible Cause

The ask_question and read_wiki_contents tools may be using a different repository lookup/query mechanism than read_wiki_structure.

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