This repository includes information about software, data organization, and common workflows on the cluster.
Configure your shell environment
(reach out to admin for permissions)Mounting LTS locally
Running Jupyter Notebooks on the server using VSCode
Run R scripts from the command line
How do I access GitHub Copilot?
(under construction)How do I avoid losing work when I lose my SSH connection?
Storing raw and processed data files
Submit batch scripts sequentially using dependancies
Parallelization
Processing paired-end read fastq files to get unique amplicon sequence counts