isic-challenge-scoring/pyproject.toml at master · ImageMarkup/isic-challenge-scoring · GitHub

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[build-system]
requires = ["hatchling", "hatch-vcs"]
build-backend = "hatchling.build"

[project]
name = "isic-challenge-scoring"
description = "Submission scoring for the ISIC Challenge."
readme = "README.md"
requires-python = ">=3.13"
license = "Apache-2.0"
license-files = ["LICENSE"]
maintainers = [{ name = "ISIC Archive", email = "support@isic-archive.com" }]
keywords = [
  "challenge",
  "isic",
  "isic-challenge",
  "scoring"
]
classifiers = [
  "Development Status :: 5 - Production/Stable",
  "Operating System :: OS Independent",
  "Programming Language :: Python",
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3.13",
]
dependencies = [
  "click",
  "click-pathlib",
  "numpy",
  "pandas>=1.1",
  "pillow>=7",
  "rdp",
  "scipy",
  "scikit-learn",
  "zipfile-deflate64",
]
dynamic = ["version"]

[project.urls]
Repository = "https://github.com/ImageMarkup/isic-challenge-scoring"
"Bug Reports" = "https://github.com/ImageMarkup/isic-challenge-scoring/issues"

[project.scripts]
isic-challenge-scoring = "isic_challenge_scoring.__main__:cli"

[dependency-groups]
dev = [
  "tox",
  "tox-uv",
]
lint = [
  "flake8",
  "flake8-black",
  "flake8-bugbear",
  "flake8-docstrings",
  "flake8-isort",
  "flake8-quotes",
  "pep8-naming",
]
format = [
  "black",
  "isort",
]
type = [
  "mypy",
  "pandas-stubs",
  "microsoft-python-type-stubs",
]
test = [
  "pytest",
  "pytest-cov",
]

[tool.hatch.build]
packages = [
  "isic_challenge_scoring",
]

[tool.hatch.version]
source = "vcs"

[tool.uv.sources]
microsoft-python-type-stubs = { git = "https://github.com/microsoft/python-type-stubs.git" }

[tool.black]
line-length = 100
skip-string-normalization = true
target-version = ["py313"]

[tool.isort]
profile = "black"
line_length = 100
# Sort by name, don't cluster "from" vs "import"
force_sort_within_sections = true
# Combines "as" imports on the same line
combine_as_imports = true

[tool.mypy]
files = [
  "isic_challenge_scoring",
  "tests",
]
check_untyped_defs = true
ignore_missing_imports = true
show_error_codes = true
warn_redundant_casts = true
warn_unused_configs = true
warn_unused_ignores = true

[[tool.mypy.overrides]]
module = [
  "rdp",
  "zipfile_deflate64",
]
ignore_missing_imports = true

[tool.pytest.ini_options]
addopts = [
  # Test utilies should be imported absolutely from the pythonpath,
  # so use the Pytest-reccomended "importlib" mode
  "--import-mode=importlib",
  "--strict-config",
  "--strict-markers",
  "--showlocals",
  "--verbose",
  "--cov",
]
filterwarnings = [
  "error",
  # The "rdp" package is unmaintained and calls "numpy.cross" in a harmless but deprecrated way
  "ignore:Arrays of 2-dimensional vectors are deprecated:DeprecationWarning:rdp",
]
testpaths = [
  "tests",
]

[tool.coverage.run]
source_pkgs = [
  "isic_challenge_scoring",
]

[tool.coverage.paths]
source = [
  "isic_challenge_scoring/",
  ".tox/**/site-packages/isic_challenge_scoring/",
]

[tool.coverage.report]
skip_empty = true