DESCRIPTION

Package: epilab
Type: Package
Title: EpiLab Functions for workflow implementation
Version: 0.5-0
Date: 2014-03-25
Authors@R: c(person('Gustavo', 'Fernandez Bayon', role=c('aut', 'cre'),
    email='fernandezgustavo@uniovi.es'))
Author: Gustavo Fernandez Bayon
Maintainer: Gustavo Fernandez Bayon <fernandezgustavo@uniovi.es>
Description: Compilation of data, functions and other stuff intended to be used
    inside the EpiLab for the implementation of data processing workflows. Most
    of the functions are related to the analysis of Illumina 450k microarrays.
    For now, the number of functions and methods is so low that I have decide
    to keep everything inside only one package. In the future, this package
    might be splitted to take into account the different aspects of the lab
    workflows.
Depends:
    methods
Imports:
    AnnotationDbi,
    Biostrings,
    BSgenome.Hsapiens.UCSC.hg19,
    FDb.InfiniumMethylation.hg19,
    functional,
    GenomicFeatures,
    GenomicRanges,
    ggplot2,
    IlluminaHumanMethylation450k.db,
    IRanges,
    matrixStats,
    org.Hs.eg.db,
    reshape2,
    rtracklayer,
    TxDb.Hsapiens.UCSC.hg19.knownGene
Suggests:
    testthat,
    minfi
License: Artistic-2.0