From c24e859ab1141da8aff7a236f6985f9db349b4c2 Mon Sep 17 00:00:00 2001 From: labkey-matthewb Date: Tue, 20 Jan 2026 12:28:34 -0800 Subject: [PATCH 1/2] let API pull in google dependencies --- SequenceAnalysis/build.gradle | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/SequenceAnalysis/build.gradle b/SequenceAnalysis/build.gradle index 532829490..2183f87c0 100644 --- a/SequenceAnalysis/build.gradle +++ b/SequenceAnalysis/build.gradle @@ -148,6 +148,10 @@ dependencies { exclude group: "org.apache.commons", module: "commons-collections4" // NOTE: this is a dependency of picard->google-cloud-storage. there is a vunerability in 1.6.8 that does not seem fixed as of 1.6.9 exclude group: "org.threeten", module: "threetenbp" + // google-genai dependencies in API pull in newer versions of these modules + exclude group: "com.google.api", module : "api-common" + exclude group: "com.google.auth", module : "google-auth-library-oauth2-http" + exclude group: "com.google.auth", module : "google-auth-library-credentials" } ) From 307eac562c1c5d90d488c5afdd79f42625a5a435 Mon Sep 17 00:00:00 2001 From: labkey-matthewb Date: Tue, 20 Jan 2026 17:08:20 -0800 Subject: [PATCH 2/2] let's try "force" instead of "exclude" --- SequenceAnalysis/build.gradle | 4 ---- 1 file changed, 4 deletions(-) diff --git a/SequenceAnalysis/build.gradle b/SequenceAnalysis/build.gradle index 2183f87c0..532829490 100644 --- a/SequenceAnalysis/build.gradle +++ b/SequenceAnalysis/build.gradle @@ -148,10 +148,6 @@ dependencies { exclude group: "org.apache.commons", module: "commons-collections4" // NOTE: this is a dependency of picard->google-cloud-storage. there is a vunerability in 1.6.8 that does not seem fixed as of 1.6.9 exclude group: "org.threeten", module: "threetenbp" - // google-genai dependencies in API pull in newer versions of these modules - exclude group: "com.google.api", module : "api-common" - exclude group: "com.google.auth", module : "google-auth-library-oauth2-http" - exclude group: "com.google.auth", module : "google-auth-library-credentials" } )