From 3ff1bed1abbb3de850001023c36109b7026062cf Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Thu, 12 Feb 2026 09:14:21 -0800
Subject: [PATCH 1/9] Bump versions

---
 poetry.lock    | 351 +++++++++++++++++++++----------------------------
 pyproject.toml |  10 +-
 2 files changed, 153 insertions(+), 208 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 666d4efa4..177d650db 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 2.2.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 2.1.4 and should not be changed by hand.
 
 [[package]]
 name = "alabaster"
@@ -36,9 +36,6 @@ files = [
     {file = "astroid-4.0.2.tar.gz", hash = "sha256:ac8fb7ca1c08eb9afec91ccc23edbd8ac73bb22cbdd7da1d488d9fb8d6579070"},
 ]
 
-[package.dependencies]
-typing-extensions = {version = ">=4", markers = "python_version < \"3.11\""}
-
 [[package]]
 name = "babel"
 version = "2.17.0"
@@ -304,9 +301,6 @@ files = [
     {file = "coverage-7.13.0.tar.gz", hash = "sha256:a394aa27f2d7ff9bc04cf703817773a59ad6dfbd577032e690f961d2460ee936"},
 ]
 
-[package.dependencies]
-tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.11.0a6\" and extra == \"toml\""}
-
 [package.extras]
 toml = ["tomli ; python_full_version <= \"3.11.0a6\""]
 
@@ -338,25 +332,6 @@ files = [
     {file = "docutils-0.16.tar.gz", hash = "sha256:c2de3a60e9e7d07be26b7f2b00ca0309c207e06c100f9cc2a94931fc75a478fc"},
 ]
 
-[[package]]
-name = "exceptiongroup"
-version = "1.3.1"
-description = "Backport of PEP 654 (exception groups)"
-optional = false
-python-versions = ">=3.7"
-groups = ["dev"]
-markers = "python_version == \"3.10\""
-files = [
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-    {file = "exceptiongroup-1.3.1.tar.gz", hash = "sha256:8b412432c6055b0b7d14c310000ae93352ed6754f70fa8f7c34141f91c4e3219"},
-]
-
-[package.dependencies]
-typing-extensions = {version = ">=4.6.0", markers = "python_version < \"3.13\""}
-
-[package.extras]
-test = ["pytest (>=6)"]
-
 [[package]]
 name = "h5py"
 version = "3.15.1"
@@ -608,48 +583,57 @@ files = [
 
 [[package]]
 name = "numpy"
-version = "1.26.4"
+version = "2.0.2"
 description = "Fundamental package for array computing in Python"
 optional = false
 python-versions = ">=3.9"
 groups = ["main", "dev"]
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 [[package]]
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-docs = ["furo", "olefile", "sphinx (>=2.4)", "sphinx-copybutton", "sphinx-inline-tabs", "sphinx-removed-in", "sphinxext-opengraph"]
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-    {file = "tomli-2.3.0-cp313-cp313-macosx_11_0_arm64.whl", hash = "sha256:be71c93a63d738597996be9528f4abe628d1adf5e6eb11607bc8fe1a510b5dae"},
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-    {file = "tomli-2.3.0-cp314-cp314t-win32.whl", hash = "sha256:a1f7f282fe248311650081faafa5f4732bdbfef5d45fe3f2e702fbc6f2d496e0"},
-    {file = "tomli-2.3.0-cp314-cp314t-win_amd64.whl", hash = "sha256:70a251f8d4ba2d9ac2542eecf008b3c8a9fc5c3f9f02c56a9d7952612be2fdba"},
-    {file = "tomli-2.3.0-py3-none-any.whl", hash = "sha256:e95b1af3c5b07d9e643909b5abbec77cd9f1217e6d0bca72b0234736b9fb1f1b"},
-    {file = "tomli-2.3.0.tar.gz", hash = "sha256:64be704a875d2a59753d80ee8a533c3fe183e3f06807ff7dc2232938ccb01549"},
-]
-
 [[package]]
 name = "tomlkit"
 version = "0.13.3"
@@ -1459,12 +1405,11 @@ version = "4.15.0"
 description = "Backported and Experimental Type Hints for Python 3.9+"
 optional = false
 python-versions = ">=3.9"
-groups = ["main", "dev"]
+groups = ["main"]
 files = [
     {file = "typing_extensions-4.15.0-py3-none-any.whl", hash = "sha256:f0fa19c6845758ab08074a0cfa8b7aecb71c999ca73d62883bc25cc018c4e548"},
     {file = "typing_extensions-4.15.0.tar.gz", hash = "sha256:0cea48d173cc12fa28ecabc3b837ea3cf6f38c6d1136f85cbaaf598984861466"},
 ]
-markers = {dev = "python_version == \"3.10\""}
 
 [[package]]
 name = "typing-inspection"
@@ -1501,5 +1446,5 @@ zstd = ["backports-zstd (>=1.0.0) ; python_version < \"3.14\""]
 
 [metadata]
 lock-version = "2.1"
-python-versions = ">=3.10,<4.0"
-content-hash = "18f7516caaf8de0f2d83bdc2fdeea6f842283aa8d0138519938b18e828799c79"
+python-versions = ">=3.12,<3.15"
+content-hash = "e65ed379c37423e4101a15d79be80cd984fd66989a7c9ab77322fe4b2cbb0379"
diff --git a/pyproject.toml b/pyproject.toml
index a3609ae8f..ed810302e 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -13,7 +13,7 @@ build-backend = "poetry_dynamic_versioning.backend"
 
 [project]
 name = "geoh5py"
-requires-python = ">=3.10,<4.0"
+requires-python = ">=3.12,<3.15"
 
 
 description = "Python API for geoh5, an open file format for geoscientific data"
@@ -63,9 +63,9 @@ include = [
 version = "0.0.0.dev0"
 
 [tool.poetry.dependencies]
-h5py = "^3.2.1"
-numpy = "~1.26.0"
-Pillow = "~10.3.0"
+h5py = "^3.15.0"
+numpy = "~2.0.0"
+Pillow = "~12.1.0"
 pydantic = "^2.12.0"
 
 [tool.poetry.group.dev.dependencies]
@@ -80,7 +80,7 @@ scipy = "~1.14.0"
 sphinx = "^3.0"
 sphinx-autodoc-typehints = "^1.10"
 sphinx-rtd-theme = "^0.4.3"
-h5py = "^3.14.0"
+h5py = "^3.15.0"
 
 [tool.poetry.requires-plugins]
 poetry-dynamic-versioning = { version = ">=1.9.1,<2.0.0", extras = ["plugin"] }

From 199da3f6318b721b40799df037ded7ffd37f1d4d Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Thu, 12 Feb 2026 09:14:54 -0800
Subject: [PATCH 2/9] Bump gitactions

---
 .github/workflows/python_analysis.yml   | 6 +++---
 .github/workflows/python_deploy_dev.yml | 4 ++--
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/python_analysis.yml b/.github/workflows/python_analysis.yml
index a3d5f099d..294014d5f 100644
--- a/.github/workflows/python_analysis.yml
+++ b/.github/workflows/python_analysis.yml
@@ -33,7 +33,7 @@ jobs:
     with:
       package-manager: 'poetry'
       app-name: 'geoh5py'
-      python-version: '3.10'
+      python-version: '3.12'
   call-workflow-pytest:
     name: Pytest
     uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-pytest.yml@v2
@@ -42,10 +42,10 @@ jobs:
       pull-requests: read
     with:
       package-manager: 'poetry'
-      python-versions: '["3.10", "3.11", "3.12"]'
+      python-versions: '["3.12", "3.13", "3.14"]'
       os: '["ubuntu-latest", "windows-latest"]'
       cache-number: 1
-      codecov-reference-python-version: '3.10'
+      codecov-reference-python-version: '3.12'
       codecov-reference-os: '["windows-latest"]'
     secrets:
       CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
diff --git a/.github/workflows/python_deploy_dev.yml b/.github/workflows/python_deploy_dev.yml
index 3dc5b695c..4c8dac470 100644
--- a/.github/workflows/python_deploy_dev.yml
+++ b/.github/workflows/python_deploy_dev.yml
@@ -19,7 +19,7 @@ jobs:
       contents: write
     with:
       package-name: 'geoh5py'
-      python-version: '3.10'
+      python-version: '3.12'
       source-repo-names: '["public-noremote-conda-dev"]'
       conda-channels: '["conda-forge"]'
       publish-repo-names: '["public-noremote-conda-dev"]'
@@ -35,7 +35,7 @@ jobs:
       package-manager: 'poetry'
       package-name: 'geoh5py'
       version-tag: ${{ github.ref_name }}
-      python-version: '3.10'
+      python-version: '3.12'
       virtual-repo-names: '["public-pypi-dev", "test-pypi"]'
     secrets:
       JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}

From 84e4d20a541ac82d5579f42aea28bb2bd233fed2 Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Thu, 12 Feb 2026 10:57:14 -0800
Subject: [PATCH 3/9] Update tests

---
 geoh5py/data/referenced_data.py | 7 +++++++
 tests/coordinate_system_test.py | 4 +---
 tests/geo_image_test.py         | 4 +---
 3 files changed, 9 insertions(+), 6 deletions(-)

diff --git a/geoh5py/data/referenced_data.py b/geoh5py/data/referenced_data.py
index 9e23e2358..f7725e98b 100644
--- a/geoh5py/data/referenced_data.py
+++ b/geoh5py/data/referenced_data.py
@@ -212,3 +212,10 @@ def add_data_map(self, name: str, values: np.ndarray | dict, public: bool = True
         """
         data = self.parent.add_data_map(self, name, values, public)
         return data
+
+    @property
+    def nan_value(self):
+        """
+        Nan-Data-Value
+        """
+        return 0
diff --git a/tests/coordinate_system_test.py b/tests/coordinate_system_test.py
index d7d5f7c54..28d693f90 100644
--- a/tests/coordinate_system_test.py
+++ b/tests/coordinate_system_test.py
@@ -51,9 +51,7 @@ def test_coordinate_system(tmp_path):
     workspace = Workspace.create(tmp_path / r"geo_image_test.geoh5")
 
     # create and save a tiff
-    image = Image.fromarray(
-        np.random.randint(0, 255, (128, 128, 3)).astype("uint16"), "RGB"
-    )
+    image = Image.fromarray(np.random.randint(0, 255, (128, 128)), "RGB")
 
     for id_ in tag.items():
         image.getexif()[id_[0]] = id_[1]
diff --git a/tests/geo_image_test.py b/tests/geo_image_test.py
index 9b353d306..b6e296b76 100644
--- a/tests/geo_image_test.py
+++ b/tests/geo_image_test.py
@@ -375,9 +375,7 @@ def test_georeference_image(tmp_path):
         assert isinstance(geoimage.image_georeferenced, Image.Image)
 
         # test grid2d errors
-        with pytest.raises(
-            ValueError, match="conversion from RGB to bidon not supported"
-        ):
+        with pytest.raises(ValueError, match="image has wrong mode"):
             geoimage.to_grid2d(new_name="RGB", mode="bidon")
 
         # test save_as

From ba9c28e73432a0511d3c596c32a566763a8e50af Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Fri, 13 Feb 2026 14:24:27 -0800
Subject: [PATCH 4/9] Re-lock numpy on 2.4.2

---
 poetry.lock    | 229 ++++++++++++++++++++++++++++++-------------------
 pyproject.toml |   4 +-
 2 files changed, 144 insertions(+), 89 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 177d650db..27062e207 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -583,57 +583,84 @@ files = [
 
 [[package]]
 name = "numpy"
-version = "2.0.2"
+version = "2.4.2"
 description = "Fundamental package for array computing in Python"
 optional = false
-python-versions = ">=3.9"
+python-versions = ">=3.11"
 groups = ["main", "dev"]
 files = [
-    {file = "numpy-2.0.2-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:51129a29dbe56f9ca83438b706e2e69a39892b5eda6cedcb6b0c9fdc9b0d3ece"},
-    {file = "numpy-2.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:f15975dfec0cf2239224d80e32c3170b1d168335eaedee69da84fbe9f1f9cd04"},
-    {file = "numpy-2.0.2-cp310-cp310-macosx_14_0_arm64.whl", hash = "sha256:8c5713284ce4e282544c68d1c3b2c7161d38c256d2eefc93c1d683cf47683e66"},
-    {file = "numpy-2.0.2-cp310-cp310-macosx_14_0_x86_64.whl", hash = "sha256:becfae3ddd30736fe1889a37f1f580e245ba79a5855bff5f2a29cb3ccc22dd7b"},
-    {file = "numpy-2.0.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:2da5960c3cf0df7eafefd806d4e612c5e19358de82cb3c343631188991566ccd"},
-    {file = "numpy-2.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:496f71341824ed9f3d2fd36cf3ac57ae2e0165c143b55c3a035ee219413f3318"},
-    {file = "numpy-2.0.2-cp310-cp310-musllinux_1_1_x86_64.whl", hash = "sha256:a61ec659f68ae254e4d237816e33171497e978140353c0c2038d46e63282d0c8"},
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 [[package]]
 name = "setuptools"
@@ -1447,4 +1502,4 @@ zstd = ["backports-zstd (>=1.0.0) ; python_version < \"3.14\""]
 [metadata]
 lock-version = "2.1"
 python-versions = ">=3.12,<3.15"
-content-hash = "e65ed379c37423e4101a15d79be80cd984fd66989a7c9ab77322fe4b2cbb0379"
+content-hash = "ebebaf6ddaa76952526e739bca1a471ad49089acdf19d894004d3755a89b26cf"
diff --git a/pyproject.toml b/pyproject.toml
index ed810302e..50424f889 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -64,7 +64,7 @@ version = "0.0.0.dev0"
 
 [tool.poetry.dependencies]
 h5py = "^3.15.0"
-numpy = "~2.0.0"
+numpy = "~2.4.0"
 Pillow = "~12.1.0"
 pydantic = "^2.12.0"
 
@@ -76,7 +76,7 @@ pylint = "*"
 pytest = "*"
 pytest-cov = "*"
 pyyaml = '*'
-scipy = "~1.14.0"
+scipy = "~1.17.0"
 sphinx = "^3.0"
 sphinx-autodoc-typehints = "^1.10"
 sphinx-rtd-theme = "^0.4.3"

From 38d100ce192a55bd9572d9d4222bd06f3a00d404 Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Mon, 16 Feb 2026 10:01:27 -0800
Subject: [PATCH 5/9] Update recipe

---
 recipe.yaml | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/recipe.yaml b/recipe.yaml
index a209b6eca..a7e893032 100644
--- a/recipe.yaml
+++ b/recipe.yaml
@@ -3,7 +3,7 @@ schema_version: 1
 context:
   name: "geoh5py"
   version: "0.0.0.dev0"  # This will be replaced by the actual version in the build process
-  python_min: "3.10"
+  python_min: "3.12"
   module_name: ${{ name|lower|replace("-", "_") }}
 
 package:
@@ -27,9 +27,9 @@ requirements:
     - pip
   run:
     - python >=${{ python_min }}
-    - h5py >=3.2.1, 3.*
-    - numpy >=1.26.0, 1.26.*
-    - pillow >=10.3.0, 10.3.*
+    - h5py >=3.15.0, 3.*
+    - numpy >=2.4.0, 2.4.*
+    - pillow >=12.1.0, 12.1.*
     - pydantic >=2.12.0, 2.*
 
 tests:
@@ -42,7 +42,7 @@ tests:
     requirements:
       run:
         - pytest
-        - scipy >= 1.14.0, <1.15.dev
+        - scipy >= 1.17.0, <1.18.dev
     files:
       source:
         - tests/

From c177431c791a5f5dd280985ddaf3615790e655fa Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Mon, 16 Feb 2026 11:13:23 -0800
Subject: [PATCH 6/9] Attempt fix for linux

---
 .pre-commit-config.yaml         | 2 +-
 poetry.lock                     | 2 +-
 pyproject.toml                  | 2 +-
 tests/coordinate_system_test.py | 4 +++-
 4 files changed, 6 insertions(+), 4 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index fce453607..10e2915cc 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -36,7 +36,7 @@ repos:
     -   id: mypy
         additional_dependencies: [
 #            numpy==1.26.*,  # TODO: fix mypy errors related to numpy
-            pydantic==2.5.*,
+            pydantic==2.12.*,
             tomli, # to read config from pyproject.toml
             types-toml,
             types-PyYAML,
diff --git a/poetry.lock b/poetry.lock
index 27062e207..0f4f8b449 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1502,4 +1502,4 @@ zstd = ["backports-zstd (>=1.0.0) ; python_version < \"3.14\""]
 [metadata]
 lock-version = "2.1"
 python-versions = ">=3.12,<3.15"
-content-hash = "ebebaf6ddaa76952526e739bca1a471ad49089acdf19d894004d3755a89b26cf"
+content-hash = "45511e488a8b6f992aabf6fdcec4470d6e2ef853b551d00c00e99b62f1110386"
diff --git a/pyproject.toml b/pyproject.toml
index 50424f889..94e885599 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -66,7 +66,7 @@ version = "0.0.0.dev0"
 h5py = "^3.15.0"
 numpy = "~2.4.0"
 Pillow = "~12.1.0"
-pydantic = "^2.12.0"
+pydantic = "~2.12.0"
 
 [tool.poetry.group.dev.dependencies]
 lockfile = "^0.12.2"
diff --git a/tests/coordinate_system_test.py b/tests/coordinate_system_test.py
index 28d693f90..9207a89f7 100644
--- a/tests/coordinate_system_test.py
+++ b/tests/coordinate_system_test.py
@@ -51,7 +51,9 @@ def test_coordinate_system(tmp_path):
     workspace = Workspace.create(tmp_path / r"geo_image_test.geoh5")
 
     # create and save a tiff
-    image = Image.fromarray(np.random.randint(0, 255, (128, 128)), "RGB")
+    image = Image.fromarray(
+        np.random.randint(0, 255, (128, 128, 3)).astype("uint8"), "RGB"
+    )
 
     for id_ in tag.items():
         image.getexif()[id_[0]] = id_[1]

From 3227ff0f5d43be0275e9db55dca311ac8cb4a416 Mon Sep 17 00:00:00 2001
From: dominiquef <dominiquef@mirageoscience.com>
Date: Tue, 17 Feb 2026 09:12:08 -0800
Subject: [PATCH 7/9] Line up recipe

---
 recipe.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/recipe.yaml b/recipe.yaml
index a7e893032..e1cfa8dc9 100644
--- a/recipe.yaml
+++ b/recipe.yaml
@@ -30,7 +30,7 @@ requirements:
     - h5py >=3.15.0, 3.*
     - numpy >=2.4.0, 2.4.*
     - pillow >=12.1.0, 12.1.*
-    - pydantic >=2.12.0, 2.*
+    - pydantic >=2.12.0, 2.12.*
 
 tests:
   - python:

From 0d9f372f072076fe25f1b50a0605a01ddc125306 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?S=C3=A9bastien=20Hensgen?=
 <24550538+sebhmg@users.noreply.github.com>
Date: Tue, 17 Feb 2026 14:43:12 -0500
Subject: [PATCH 8/9] [GEOPY-2661] simplify dependency version expression

---
 recipe.yaml | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/recipe.yaml b/recipe.yaml
index e1cfa8dc9..47a982b26 100644
--- a/recipe.yaml
+++ b/recipe.yaml
@@ -28,9 +28,9 @@ requirements:
   run:
     - python >=${{ python_min }}
     - h5py >=3.15.0, 3.*
-    - numpy >=2.4.0, 2.4.*
-    - pillow >=12.1.0, 12.1.*
-    - pydantic >=2.12.0, 2.12.*
+    - numpy 2.4.*
+    - pillow 12.1.*
+    - pydantic 2.12.*
 
 tests:
   - python:
@@ -42,7 +42,7 @@ tests:
     requirements:
       run:
         - pytest
-        - scipy >= 1.17.0, <1.18.dev
+        - scipy 1.17.*
     files:
       source:
         - tests/

From a5bcf4b50c50d712c463baeb15bea768a4b76c39 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?S=C3=A9bastien=20Hensgen?=
 <24550538+sebhmg@users.noreply.github.com>
Date: Tue, 17 Feb 2026 14:52:29 -0500
Subject: [PATCH 9/9] [GEOPY-2661] no need of h5py in dev deps, as already a
 main one

---
 poetry.lock    | 273 +++++++++++++++++++++++++------------------------
 pyproject.toml |   1 -
 2 files changed, 141 insertions(+), 133 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 0f4f8b449..62e26dc5c 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 2.1.4 and should not be changed by hand.
+# This file is automatically @generated by Poetry 2.2.1 and should not be changed by hand.
 
 [[package]]
 name = "alabaster"
@@ -26,26 +26,26 @@ files = [
 
 [[package]]
 name = "astroid"
-version = "4.0.2"
+version = "4.0.4"
 description = "An abstract syntax tree for Python with inference support."
 optional = false
 python-versions = ">=3.10.0"
 groups = ["dev"]
 files = [
-    {file = "astroid-4.0.2-py3-none-any.whl", hash = "sha256:d7546c00a12efc32650b19a2bb66a153883185d3179ab0d4868086f807338b9b"},
-    {file = "astroid-4.0.2.tar.gz", hash = "sha256:ac8fb7ca1c08eb9afec91ccc23edbd8ac73bb22cbdd7da1d488d9fb8d6579070"},
+    {file = "astroid-4.0.4-py3-none-any.whl", hash = "sha256:52f39653876c7dec3e3afd4c2696920e05c83832b9737afc21928f2d2eb7a753"},
+    {file = "astroid-4.0.4.tar.gz", hash = "sha256:986fed8bcf79fb82c78b18a53352a0b287a73817d6dbcfba3162da36667c49a0"},
 ]
 
 [[package]]
 name = "babel"
-version = "2.17.0"
+version = "2.18.0"
 description = "Internationalization utilities"
 optional = false
 python-versions = ">=3.8"
 groups = ["dev"]
 files = [
-    {file = "babel-2.17.0-py3-none-any.whl", hash = "sha256:4d0b53093fdfb4b21c92b5213dba5a1b23885afa8383709427046b21c366e5f2"},
-    {file = "babel-2.17.0.tar.gz", hash = "sha256:0c54cffb19f690cdcc52a3b50bcbf71e07a808d1c80d549f2459b9d2cf0afb9d"},
+    {file = "babel-2.18.0-py3-none-any.whl", hash = "sha256:e2b422b277c2b9a9630c1d7903c2a00d0830c409c59ac8cae9081c92f1aeba35"},
+    {file = "babel-2.18.0.tar.gz", hash = "sha256:b80b99a14bd085fcacfa15c9165f651fbb3406e66cc603abf11c5750937c992d"},
 ]
 
 [package.extras]
@@ -53,14 +53,14 @@ dev = ["backports.zoneinfo ; python_version < \"3.9\"", "freezegun (>=1.0,<2.0)"
 
 [[package]]
 name = "certifi"
-version = "2025.11.12"
+version = "2026.1.4"
 description = "Python package for providing Mozilla's CA Bundle."
 optional = false
 python-versions = ">=3.7"
 groups = ["dev"]
 files = [
-    {file = "certifi-2025.11.12-py3-none-any.whl", hash = "sha256:97de8790030bbd5c2d96b7ec782fc2f7820ef8dba6db909ccf95449f2d062d4b"},
-    {file = "certifi-2025.11.12.tar.gz", hash = "sha256:d8ab5478f2ecd78af242878415affce761ca6bc54a22a27e026d7c25357c3316"},
+    {file = "certifi-2026.1.4-py3-none-any.whl", hash = "sha256:9943707519e4add1115f44c2bc244f782c0249876bf51b6599fee1ffbedd685c"},
+    {file = "certifi-2026.1.4.tar.gz", hash = "sha256:ac726dd470482006e014ad384921ed6438c457018f4b3d204aea4281258b2120"},
 ]
 
 [[package]]
@@ -201,104 +201,118 @@ files = [
 
 [[package]]
 name = "coverage"
-version = "7.13.0"
+version = "7.13.4"
 description = "Code coverage measurement for Python"
 optional = false
 python-versions = ">=3.10"
 groups = ["dev"]
 files = [
-    {file = "coverage-7.13.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:02d9fb9eccd48f6843c98a37bd6817462f130b86da8660461e8f5e54d4c06070"},
-    {file = "coverage-7.13.0-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:367449cf07d33dc216c083f2036bb7d976c6e4903ab31be400ad74ad9f85ce98"},
-    {file = "coverage-7.13.0-cp310-cp310-manylinux1_i686.manylinux_2_28_i686.manylinux_2_5_i686.whl", hash = "sha256:cdb3c9f8fef0a954c632f64328a3935988d33a6604ce4bf67ec3e39670f12ae5"},
-    {file = "coverage-7.13.0-cp310-cp310-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl", hash = "sha256:d10fd186aac2316f9bbb46ef91977f9d394ded67050ad6d84d94ed6ea2e8e54e"},
-    {file = "coverage-7.13.0-cp310-cp310-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:7f88ae3e69df2ab62fb0bc5219a597cb890ba5c438190ffa87490b315190bb33"},
-    {file = "coverage-7.13.0-cp310-cp310-manylinux_2_31_riscv64.manylinux_2_39_riscv64.whl", hash = "sha256:c4be718e51e86f553bcf515305a158a1cd180d23b72f07ae76d6017c3cc5d791"},
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 [package.extras]
@@ -306,14 +320,14 @@ toml = ["tomli ; python_full_version <= \"3.11.0a6\""]
 
 [[package]]
 name = "dill"
-version = "0.4.0"
+version = "0.4.1"
 description = "serialize all of Python"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 groups = ["dev"]
 files = [
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 [package.extras]
@@ -338,7 +352,7 @@ version = "3.15.1"
 description = "Read and write HDF5 files from Python"
 optional = false
 python-versions = ">=3.10"
-groups = ["main", "dev"]
+groups = ["main"]
 files = [
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@@ -665,14 +679,14 @@ files = [
 
 [[package]]
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+version = "26.0"
 description = "Core utilities for Python packages"
 optional = false
 python-versions = ">=3.8"
 groups = ["dev"]
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 [[package]]
@@ -786,21 +800,16 @@ xmp = ["defusedxml"]
 
 [[package]]
 name = "platformdirs"
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+version = "4.9.2"
 description = "A small Python package for determining appropriate platform-specific dirs, e.g. a `user data dir`."
 optional = false
 python-versions = ">=3.10"
 groups = ["dev"]
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-[package.extras]
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-type = ["mypy (>=1.18.2)"]
-
 [[package]]
 name = "pluggy"
 version = "1.6.0"
@@ -1241,24 +1250,24 @@ test = ["Cython", "array-api-strict (>=2.3.1)", "asv", "gmpy2", "hypothesis (>=6
 
 [[package]]
 name = "setuptools"
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 description = "Easily download, build, install, upgrade, and uninstall Python packages"
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 python-versions = ">=3.9"
 groups = ["dev"]
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 core = ["importlib_metadata (>=6) ; python_version < \"3.10\"", "jaraco.functools (>=4)", "jaraco.text (>=3.7)", "more_itertools", "more_itertools (>=8.8)", "packaging (>=24.2)", "platformdirs (>=4.2.2)", "tomli (>=2.0.1) ; python_version < \"3.11\"", "wheel (>=0.43.0)"]
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 doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "pyproject-hooks (!=1.1)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier", "towncrier (<24.7)"]
 enabler = ["pytest-enabler (>=2.2)"]
 test = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "ini2toml[lite] (>=0.14)", "jaraco.develop (>=7.21) ; python_version >= \"3.9\" and sys_platform != \"cygwin\"", "jaraco.envs (>=2.2)", "jaraco.path (>=3.7.2)", "jaraco.test (>=5.5)", "packaging (>=24.2)", "pip (>=19.1)", "pyproject-hooks (!=1.1)", "pytest (>=6,!=8.1.*)", "pytest-home (>=0.5)", "pytest-perf ; sys_platform != \"cygwin\"", "pytest-subprocess", "pytest-timeout", "pytest-xdist (>=3)", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel (>=0.44.0)"]
-type = ["importlib_metadata (>=7.0.2) ; python_version < \"3.10\"", "jaraco.develop (>=7.21) ; sys_platform != \"cygwin\"", "mypy (==1.14.*)", "pytest-mypy"]
+type = ["importlib_metadata (>=7.0.2) ; python_version < \"3.10\"", "jaraco.develop (>=7.21) ; sys_platform != \"cygwin\"", "mypy (==1.18.*)", "pytest-mypy"]
 
 [[package]]
 name = "snowballstemmer"
@@ -1444,14 +1453,14 @@ test = ["pytest"]
 
 [[package]]
 name = "tomlkit"
-version = "0.13.3"
+version = "0.14.0"
 description = "Style preserving TOML library"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "tomlkit-0.13.3-py3-none-any.whl", hash = "sha256:c89c649d79ee40629a9fda55f8ace8c6a1b42deb912b2a8fd8d942ddadb606b0"},
-    {file = "tomlkit-0.13.3.tar.gz", hash = "sha256:430cf247ee57df2b94ee3fbe588e71d362a941ebb545dec29b53961d61add2a1"},
+    {file = "tomlkit-0.14.0-py3-none-any.whl", hash = "sha256:592064ed85b40fa213469f81ac584f67a4f2992509a7c3ea2d632208623a3680"},
+    {file = "tomlkit-0.14.0.tar.gz", hash = "sha256:cf00efca415dbd57575befb1f6634c4f42d2d87dbba376128adb42c121b87064"},
 ]
 
 [[package]]
@@ -1483,14 +1492,14 @@ typing-extensions = ">=4.12.0"
 
 [[package]]
 name = "urllib3"
-version = "2.6.2"
+version = "2.6.3"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "urllib3-2.6.2-py3-none-any.whl", hash = "sha256:ec21cddfe7724fc7cb4ba4bea7aa8e2ef36f607a4bab81aa6ce42a13dc3f03dd"},
-    {file = "urllib3-2.6.2.tar.gz", hash = "sha256:016f9c98bb7e98085cb2b4b17b87d2c702975664e4f060c6532e64d1c1a5e797"},
+    {file = "urllib3-2.6.3-py3-none-any.whl", hash = "sha256:bf272323e553dfb2e87d9bfd225ca7b0f467b919d7bbd355436d3fd37cb0acd4"},
+    {file = "urllib3-2.6.3.tar.gz", hash = "sha256:1b62b6884944a57dbe321509ab94fd4d3b307075e0c2eae991ac71ee15ad38ed"},
 ]
 
 [package.extras]
@@ -1502,4 +1511,4 @@ zstd = ["backports-zstd (>=1.0.0) ; python_version < \"3.14\""]
 [metadata]
 lock-version = "2.1"
 python-versions = ">=3.12,<3.15"
-content-hash = "45511e488a8b6f992aabf6fdcec4470d6e2ef853b551d00c00e99b62f1110386"
+content-hash = "ae4ce0d4fdd7b3c289832e2f37d31cd6400d59227d33ac4a257318884c186f03"
diff --git a/pyproject.toml b/pyproject.toml
index 94e885599..54e319fde 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -80,7 +80,6 @@ scipy = "~1.17.0"
 sphinx = "^3.0"
 sphinx-autodoc-typehints = "^1.10"
 sphinx-rtd-theme = "^0.4.3"
-h5py = "^3.15.0"
 
 [tool.poetry.requires-plugins]
 poetry-dynamic-versioning = { version = ">=1.9.1,<2.0.0", extras = ["plugin"] }