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This repository was archived by the owner on Aug 14, 2025. It is now read-only.
This repository was archived by the owner on Aug 14, 2025. It is now read-only.

review allele frequency query - missing ALFA & gnomAD frequencies #157

@fossilfriend

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@fossilfriend

see https://www.niagads.org/genomics/app/record/variant/1:231453226:G:A:rs1769788

image

missing ALFA & gnomAD:

{
  "GoNL": {
    "gmaf": 0.2595
  },
  "TOMMO": {
    "gmaf": 0.04749
  },
  "ALSPAC": {
    "gmaf": 0.2675
  },
  "GnomAD": {
    "gmaf": 0.3335
  },
  "KOREAN": {
    "gmaf": 0.03457
  },
  "Qatari": {
    "gmaf": 0.2546
  },
  "TOPMED": {
    "gmaf": 0.3472
  },
  "Korea1K": {
    "gmaf": 0.04967
  },
  "TWINSUK": {
    "gmaf": 0.2651
  },
  "Estonian": {
    "gmaf": 0.2065
  },
  "SGDP_PRJ": {
    "gmaf": 0.6132
  },
  "Siberian": {
    "gmaf": 0.5
  },
  "GENOME_DK": {
    "gmaf": 0.3
  },
  "Vietnamese": {
    "gmaf": 0.009434
  },
  "1000Genomes": {
    "afr": 0.5492,
    "amr": 0.3818,
    "eas": 0.0327,
    "eur": 0.2535,
    "sas": 0.1033,
    "gmaf": 0.2756
  },
  "dbGaP_PopFreq": {
    "gmaf": 0.2957
  },
  "NorthernSweden": {
    "gmaf": 0.2117
  }
}

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