Update all project pages: add team members, video links, and remove template project

mshukla1 · mshukla1 · commit 9776fc2c0bc0 · 2026-01-16T14:29:21.000-06:00
diff --git a/src/content/projects/RDF-knowledge-graph-construction.md b/src/content/projects/RDF-knowledge-graph-construction.md
@@ -4,6 +4,7 @@ description: "Transforming Pathogen Data Network Resources to RDF using Large La
 tags:
   ["Knowledge Graphs", "RDF", "Linked Data", "Semantic Web", "Data Integration"]
 github: "https://github.com/NIAID-BRC-Codeathons/RDF-knowledge-graph-construction"
+video: "https://www.youtube.com/watch?v=84mxnspRuk8"
 ---
 
 \*\*Project Theme
diff --git a/src/content/projects/ai-co-scientist-protein-function.md b/src/content/projects/ai-co-scientist-protein-function.md
@@ -10,6 +10,7 @@ tags:
     "Jnana",
   ]
 github: "https://github.com/NIAID-BRC-Codeathons/ai-co-scientist-protein-function"
+video: "https://www.youtube.com/watch?v=eC1cs9bnyWo"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/ai-dataset-and-analysis-discovery.md b/src/content/projects/ai-dataset-and-analysis-discovery.md
@@ -3,6 +3,7 @@ title: "AI-Powered Analysis Pathfinder: From Research Questions to Data and Work
 description: "Enabling bench scientists to start with analysis goals and receive both relevant datasets and executable workflows—a complete path from question to execution."
 tags: ["AI", "Dataset Discovery", "Workflow Recommendation", "LLM", "ENA"]
 github: "https://github.com/NIAID-BRC-Codeathons/ai-dataset-and-analysis-discovery"
+video: "https://www.youtube.com/watch?v=XaRzwiMXUmU"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/gene-function-prediction.md b/src/content/projects/gene-function-prediction.md
@@ -3,6 +3,7 @@ title: "Assigning Functions to Uncharacterized Genes"
 description: "Leveraging machine learning and AI to predict functions of characterized and uncharacterized genes using K-mers, ensemble methods, and LLM embeddings"
 tags: ["Machine Learning", "Gene Function", "LLM", "Protein Function"]
 github: "https://github.com/NIAID-BRC-Codeathons/gene-function-prediction"
+video: "https://www.youtube.com/watch?v=3kw4v5ecxuE"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/hiperrag-literature-extraction.md b/src/content/projects/hiperrag-literature-extraction.md
@@ -10,6 +10,7 @@ tags:
     "Priority Pathogens",
   ]
 github: "https://github.com/NIAID-BRC-Codeathons/hiperrag-literature-extraction"
+video: "https://www.youtube.com/watch?v=PQ_r2Cc8OPY"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/outbreak-surveillance-monitoring.md b/src/content/projects/outbreak-surveillance-monitoring.md
@@ -3,6 +3,7 @@ title: "InterWeb Outbreak Surveillance and Progress Monitoring"
 description: "AI-powered outbreak surveillance aggregating web data sources including social media, news, case reports, and public health databases"
 tags: ["Outbreak Monitoring", "Surveillance", "AI", "Public Health", "Web Data"]
 github: "https://github.com/NIAID-BRC-Codeathons/outbreak-surveillance-monitoring"
+video: "https://www.youtube.com/watch?v=Tm2uV7Ydm6o"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/pubmed-miner.md b/src/content/projects/pubmed-miner.md
@@ -10,6 +10,7 @@ tags:
     "Mutation Detection",
   ]
 github: "https://github.com/NIAID-BRC-Codeathons/pubmed-miner"
+video: "https://www.youtube.com/watch?v=PQ_r2Cc8OPY"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/rhea-workflow-automation.md b/src/content/projects/rhea-workflow-automation.md
@@ -3,6 +3,7 @@ title: "Expanding Rhea for Automated Workflow Generation"
 description: "Extending the Rhea platform with MCP+RAG to enable automated workflow generation leveraging Galaxy and BV-BRC for infectious disease analysis"
 tags: ["Rhea", "Workflow Automation", "Galaxy", "MCP", "RAG"]
 github: "https://github.com/NIAID-BRC-Codeathons/rhea-workflow-automation"
+video: "https://www.youtube.com/watch?v=t2kotelzYZU"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/storyseq-sequence-narrative.md b/src/content/projects/storyseq-sequence-narrative.md
@@ -3,6 +3,7 @@ title: "StorySeq: Automated Sequence Narrative Generation"
 description: "Automating sequence identification and contextualization using BLAST, database queries, and LLM narrative synthesis to accelerate pathogen and AMR gene discovery"
 tags: ["LLM", "BLAST", "Narrative Generation", "Knowledge Extraction"]
 github: "https://github.com/NIAID-BRC-Codeathons/storyseq-sequence-narrative"
+video: "https://www.youtube.com/watch?v=jTAEv2hpLgQ"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/viral-phylogenetics.md b/src/content/projects/viral-phylogenetics.md
@@ -10,6 +10,7 @@ tags:
     "Virology",
   ]
 github: "https://github.com/NIAID-BRC-Codeathons/viral-phylogenetics"
+video: "https://www.youtube.com/watch?v=0fcYShCnXA4"
 ---
 
 # Viral Structural Phylogenetics
diff --git a/src/content/projects/workflow-generation-mcp.md b/src/content/projects/workflow-generation-mcp.md
@@ -3,6 +3,7 @@ title: "Generative AI-Driven Workflow Design and Execution via MCP"
 description: "Automating bioinformatics workflow design, refinement, and execution using generative AI models guided through the Model Context Protocol (MCP)"
 tags: ["AI", "Workflows", "MCP", "Automation", "LLM"]
 github: "https://github.com/NIAID-BRC-Codeathons/workflow-generation-mcp"
+video: "https://www.youtube.com/watch?v=XaRzwiMXUmU"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/workflow-training-data-extraction.md b/src/content/projects/workflow-training-data-extraction.md
@@ -3,6 +3,7 @@ title: "Extracting Training Data for Automated Workflow Generation"
 description: "Creating structured question-answer training datasets from BRC resources and publications to train LLMs for bioinformatics workflow generation"
 tags: ["LLM", "Training Data", "Workflows", "Question Answering"]
 github: "https://github.com/NIAID-BRC-Codeathons/workflow-training-data-extraction"
+video: "https://www.youtube.com/watch?v=UMoSn6r7hZ4"
 ---
 
 **Project Themes:**
diff --git a/src/content/projects/your-project-here.md b/src/content/projects/your-project-here.md

Original file line number	Diff line number	Diff line change
`@@ -10,6 +10,7 @@ tags:`
`10`	`10`	`"Jnana",`
`11`	`11`	`]`
`12`	`12`	`github: "https://github.com/NIAID-BRC-Codeathons/ai-co-scientist-protein-function"`
	`13`	`+video: "https://www.youtube.com/watch?v=eC1cs9bnyWo"`
`13`	`14`	`---`
`14`	`15`
`15`	`16`	`Project Themes:`