CAML/pca_input.yaml at master · SoftwareDevEngResearch/CAML · GitHub

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---
data:
    data_path: ../Fdf_cn_spectra_pure_binary.csv
    target_col_name: cn_coalesced
    index_col_name: name
    plot:
      - train distribution
      - test distribution

cleaning:
    pre_split_cleaning:
      nan: mean
    post_split_cleaning:
      normalize: overall min max

validation:
    holdout_fraction: 0.2
    parameters_file: narrow_search.yaml
    Kfold:
      nsplits: 5
    random_seed: 42


transformations:

    transform_names:
        - No_transform
        - PCA_all
        - PCA_30
        - PCA_20
        - PCA_10
        - PCA_5

    feature_transformations:

        - "None"
        - PCA:
            number: all
        - PCA:
            number: 30
        - PCA:
            number: 20
        - PCA:
            number: 10
        - PCA:
            number: 5

models:
  - dummy_average
  - Lasso
  - ElasticNet
  - RandomForest
  - AdaBoost
  - TPOT