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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

3.4.2 - 2026-03-14

Changed

  • docs: clarify app is sensor-agnostic, not limited to performance tests

3.4.1 - 2026-03-14

Fixed

  • update screenshots with latency indicator, fix initial range selector

3.4.0 - 2026-03-14

Added

  • add latency indicator, fast-path navigation, and bug fixes

3.3.22 - 2026-03-14

Changed

  • perf: speed up data loading, add latency monitoring

3.3.21 - 2026-03-14

Changed

  • perf: speed up data loading and add latency monitoring

3.3.20 - 2026-03-14

Fixed

  • prevent SSH tunnel from closing immediately

3.3.19 - 2026-03-14

Changed

  • docs: add Zenodo DOI badge to README

3.3.18 - 2026-03-14

Changed

  • docs: regenerate SVGs with realistic signal characteristics

3.3.17 - 2026-03-14

Fixed

  • pin numpy<2 for Python 3.9 to fix PyTables compatibility

3.3.16 - 2026-03-14

Changed

  • docs: recreate signal SVGs with realistic accelerometry patterns

3.3.15 - 2026-03-14

Fixed

  • use in-memory timestamp filter instead of HDF5 where clause for cross-version compatibility

3.3.14 - 2026-03-14

Changed

  • docs: rewrite SVGs as static (no JS), make device-placement agnostic

3.3.13 - 2026-03-14

Fixed

  • use ISO timestamps in HDF5 queries, fix StringDtype test assertion

3.3.12 - 2026-03-14

Changed

  • docs: add signal pattern diagrams and step-by-step annotation walkthrough

3.3.11 - 2026-03-14

Fixed

  • handle SSH tunnel managed by ControlMaster, keep script alive

3.3.10 - 2026-03-14

Fixed

  • keep tunnel process alive with ControlMaster=no on tunnel connection

3.3.9 - 2026-03-14

Fixed

  • shorten SSH control socket path to avoid macOS length limit

3.3.8 - 2026-03-14

Fixed

  • use SSH ControlMaster so users only authenticate once

3.3.7 - 2026-03-14

Changed

  • docs: enhance Sphinx site with annotation guide, data format reference, and improved index
  • docs: add segment/scoring/review flag context and chair stand workflow example

3.3.6 - 2026-03-14

Changed

  • docs: switch to Furo theme with UChicago maroon branding

3.3.5 - 2026-03-14

Changed

  • docs: add favicon, PyPI install instructions, fix Slurm job name

3.3.4 - 2026-03-14

Fixed

  • remove /en/ prefix from sitemap URLs

3.3.3 - 2026-03-13

Changed

  • Fix factual errors found during documentation proofreading

3.3.2 - 2026-03-12

Changed

  • docs: fix outdated URLs and demo data description

3.3.1 - 2026-03-12

Fixed

  • use late-bound ANNOTATOR_USERS and prevent config file overwrites

3.3.0 - 2026-03-12

Added

  • add test suite and CI, fix global RNG pollution and HDF5 last-row read

Changed

  • chore: gitignore JOSS manuscript files

3.2.1 - 2026-03-12

Changed

  • docs: add PyPI, license, demo, and docs badges to README

3.2.0 - 2026-03-12

Added

  • add PyPI packaging, MIT license, and citation metadata

3.1.8 - 2026-03-12

Changed

  • docs: crop whitespace from README hero image

3.1.7 - 2026-03-12

Changed

  • docs: update README hero image with regenerated UCI demo data

3.1.6 - 2026-03-12

Changed

  • docs: replace README hero image with high-res demo data screenshot

3.1.5 - 2026-03-12

Fixed

  • tighten bokeh/panel version pins to prevent blank page on HF Spaces

3.1.4 - 2026-03-12

Fixed

  • pin bokeh/panel versions and update README screenshot

3.1.3 - 2026-03-12

Fixed

  • use late-bound config paths to fix blank page in demo deployment

3.1.2 - 2026-03-12

Changed

  • docs: add app screenshots to README

3.1.1 - 2026-03-12

Fixed

  • rename app_demo.py to app.py so Panel serves at /app

3.1.0 - 2026-03-12

Added

  • Demo now uses real accelerometer data from the UCI Accelerometer & Gyro Mobile Phone Dataset (CC BY 4.0)
  • Pre-populated example annotations for both demo users showcasing all activity types, flags, and inter-annotator variability
  • Port auto-increment fallback in connect.sh when preferred local port is unavailable
  • --synthetic flag for demo/generate_data.py to force synthetic data generation

Changed

  • Renamed scripts/ to devops/ for dev/CI tooling
  • Moved generate_demo_data.py into demo/generate_data.py (co-located with demo deployment)
  • Moved startup guides from repo root into docs/ with kebab-case filenames
  • Updated all downstream references (Dockerfile, CI workflow, README, docs)

Removed

  • Tracked hpc_utils/dask.log (now gitignored)

3.0.0 - 2026-03-11

Added

  • Self-service connect.sh — auto-detects running jobs, submits new ones if needed, creates SSH tunnel, and opens browser
  • Stale SSH tunnel detection and cleanup on reconnect
  • Proper HPC environment setup in start_server.sh (module loads, conda activation)
  • Persistent Slurm jobs using nohup + sleep.py
  • Organized log output in hpc_utils/logs/

Changed

  • Consolidated slurm/ into hpc_utils/ — single folder for all HPC deployment scripts
  • App URL changed from /visualize_accelerometry/app to /app
  • Updated all documentation to reflect the new self-service workflow

Removed

  • Per-user job submission model (replaced by shared server with auto-detection)

2.2.1 - 2026-03-11

Fixed

  • correct REMOTE_DIR path

2.2.0 - 2026-03-11

Added

  • self-service connect script with auto job submission and SSH_USER config

2.1.1 - 2026-03-11

Changed

  • docs: add shared app start-up guide
  • docs: add Slurm shared server deployment guide
  • docs: add Google Search Console verification file

Fixed

  • include Google verification file in html_extra_path

2.1.0 - 2026-03-11

Added

  • add SEO improvements — sitemap, meta tags, Open Graph, robots.txt

2.0.0 - 2026-03-11

Added

  • Panel-based web app with OAuth and BasicAuth support
  • Tri-axial (x, y, z) accelerometry signal plotting with range selector
  • LTTB downsampling for smooth rendering of large datasets
  • Box-select annotation tool for labeling activity segments
  • Support for Chair Stand, TUG, 3-Meter Walk, and 6-Minute Walk tests
  • Segment, scoring, and review flag overlays with hatch patterns
  • Free-text notes on annotations
  • Multi-user file assignment with even splitting across annotators
  • Auto-save annotations to per-user Excel files
  • Canvas rendering with LTTB downsampling for performance
  • Responsive toolbar layout for different screen sizes
  • Sphinx documentation with GitHub Pages CI
  • Live demo hosted on Hugging Face Spaces with auto-deploy
  • Synthetic data generator for demo deployment
  • Auto-version workflow for conventional commit-based releases
  • Release workflow with CHANGELOG-based notes