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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8" />
<meta http-equiv="X-UA-Compatible" content="IE=edge" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<link
href="https://cdn.jsdelivr.net/npm/bootstrap@5.0.1/dist/css/bootstrap.min.css"
rel="stylesheet"
integrity="sha384-+0n0xVW2eSR5OomGNYDnhzAbDsOXxcvSN1TPprVMTNDbiYZCxYbOOl7+AMvyTG2x"
crossorigin="anonymous"
/>
<link
rel="stylesheet"
href="https://cdn.jsdelivr.net/npm/bootstrap-icons@1.3.0/font/bootstrap-icons.css"
/>
<link
href="https://api.mapbox.com/mapbox-gl-js/v2.1.1/mapbox-gl.css"
rel="stylesheet"
/>
<link rel="stylesheet" href="style.css" />
<title>MetaboRePort</title>
</head>
<body>
<!-- Showcase -->
<section
class="p-5 p-lg-0 pt-lg-5 text-center text-sm-start" style="color: #FFFFFF;background-color:#3c85c9">
<div class="container">
<div class="d-sm-flex align-items-center justify-content-between">
<div>
<h1><span> Metabolic Reconstruction Reports </span></h1>
<p >
This website hosts Metabolic Reconstruction Reports. Each report contains detailed information about the reconstruction
properties and annotations, as defined by MEMOTE (<a href="https://www.nature.com/articles/s41587-020-0446-y/" target="_blank"
style="color: #FFFFFF">Lieven et al., Nat Biotech., 2020</a>). We are continuously expanding the set of tests performed on the metabolic
reconstructions and their derived models.
The reports have been generated using the COBRA Toolbox v3 (<a href="https://www.nature.com/articles/s41596-018-0098-2" target="_blank" style="color: #FFFFFF">Heirendt et al., Nat Protoc, 2019</a>)
and link to the Virtual Metabolic Human Knowledgebase (<a href="https://academic.oup.com/nar/article/47/D1/D614/5146204" target="_blank" style="color: #FFFFFF">Noronha et al., Nucl Ac Res, 2019</a>).
</p>
</div>
</section>
</section>
<section class=" text-center text-sm-start" style="color:#3c85c9">>
<div class="container">
<?php include "bin/form_report.html" ?>
</div>
</section>
<BR><BR><BR><BR>
<section
class="bg-light text-dark p-5 p-lg-0 pt-lg-5 text-center text-sm-start"
>
<div class="container">
<div class="d-sm-flex align-items-center justify-content-between">
<div>
<h3 class="text-center">Average Scores of the <span style="color: #3c85c9"> AGORA 2 resource metabolic reconstructions </span></h3>
</div>
</div>
<div class="container">
<div class="row text-center g-4">
<div class="col-md">
<div class="card" style="color: #FFFFFF;background-color:#063e72;">
<div class="card-body text-center">
<h1 class="card-text ">
73.09 %
</h1>
<h4 class="card-title mb-3">Overall <br>Score</h3>
</div>
</div>
</div>
<div class="col-md">
<div class="card " style="color: #FFFFFF;background-color:#2766a0;">
<div class="card-body text-center">
<h1 class="card-text">
92.4 %
</h1>
<h4 class="card-title mb-3">Consistency <br>Score</h3>
</div>
</div>
</div>
<div class="col-md">
<div class="card " style="color: #FFFFFF;background-color:#3d7cb8;">
<div class="card-body text-center">
<h1 class="card-text">
77.41 %
</h1>
<h4 class="card-title mb-3">Metabolite <br>Score</h3>
</div>
</div>
</div>
<div class="col-md">
<div class="card " style="color: #FFFFFF;background-color:#4f91cf;">
<div class="card-body text-center">
<h1 class="card-text">
42.66 %
</h1>
<h4 class="card-title mb-3">Reaction <br>Score</h3>
</div>
</div>
</div>
<div class="col-md">
<div class="card " style="color: #FFFFFF;background-color:#6aabe9;">
<div class="card-body text-center">
<h1 class="card-text">
5.26 %
</h1>
<h4 class="card-title mb-3">Gene <br>Score</h3>
</div>
</div>
</div>
<div class="col-md">
<div class="card " style="color: #FFFFFF;background-color:#8ac5fc;">
<div class="card-body text-center">
<h1 class="card-text">
91.08 %
</h1>
<h4 class="card-title mb-3">SBO Term Score</h3>
</div>
</div>
</div>
</div>
</div>
</section>
<BR><BR><BR><BR>
<!-- Footer -->
<footer class="p-1 text-center fixed-bottom" style="color: #FFFFFF;background-color:#3c85c9;max-height:10%">
<div class="row align-items-end ">
<!-- <div class="col">
<p><img src="img/Banner.jpg" height=80 >
<img src="img/COBRAToolboxlogo_matlab.svg" height="80"></p>
</div>
-->
<div class="col">
<p >Powered by the <a href="https://vmh.life" target="_blank" style="color: #FFFFFF">VMH</a> and the
<a href="https://opencobra.github.io/cobratoolbox/stable/" target="_blank" style="color: #FFFFFF"> COBRA Toolbox</a> </p>
<p >Copyright © 2022 <a href="https://thielelab.eu" target="_blank" style="color: #FFFFFF">ThieleLab@Uni Galway, Ireland. </a><br></p>
</div>
<!-- <div class="col">
<p>
<img src="img/apc.jfif" height="80">
<img src="img/nuig.jfif" height="80"> </p>
</div>
-->
</div>
</footer>
<script
src="https://cdn.jsdelivr.net/npm/bootstrap@5.0.1/dist/js/bootstrap.bundle.min.js"
integrity="sha384-gtEjrD/SeCtmISkJkNUaaKMoLD0//ElJ19smozuHV6z3Iehds+3Ulb9Bn9Plx0x4"
crossorigin="anonymous"
></script>
</body>
</html>