AI assisted GO interpretation

[estulik]

Hello,
is there an easy way to install clusterProfiler 4.19.3 or above for usage of the interpret() ?,
Regards

[guidohooiveld]

See here:

#804 (comment)

At step 4 it is especially important to install the YuLab packages in the indicated order!

A bit more info is given in this blog post as well:
https://mp.weixin.qq.com/s/wUseJEYDXzRDsf4c0Xaa2w
(If needed, you can use Google translate or similar)

Core Idea:

Use pak: Abandon devtools and use pak instead. pak is a next-generation R package management tool, offering fast installation speed and extremely strong dependency resolution capabilities.

Step-by-Step Installation: First install CRAN dependencies, then Bioc dependencies, and finally install the YuLab core packages in sequence.

Specify GitHub Repository: Explicitly tell R where to download the latest development version.

[estulik]

Thanks alot guidohooiveld!
The clusterProfiler package really is amazing .O.
You don't happen to know if there is way to also get to the sources/papers which have been used in the LLM analysis of my GO_object? I know that deepseek (the api i used for the interpretation) provides the user with the links to the sources, so I thought that maybe clusterProfiler does the same.
Have a nice weekend!