startup.m

%% MatLAB startup script
%
% This script defines paths and default settings for MINDI. Edit as
% required.
%
% This script will be run automatically if, under windows, the MatLAB icon
% properties 'Start in' field is set to the scripts directory where this
% file is located.  Under UNIX using ~/matlab as your scripts directory will
% achieve the same purpose.  Alternatively you may change to your scripts
% directory from the MatLAB prompt and type startup.


%% EDIT THIS PATH FOR YOUR SETUP
% Path to MINDI root directory (with trailing slash).
global ROOT; 
ROOT = '~/midas-3/';

%% Define model directories for MEX functions (locations of model data files)
global IRI95;   IRI95  = [ROOT,'source/iri95'];
global IGRF;    IGRF   = [ROOT,'source/igrf'];
global WEIMER;  WEIMER = [ROOT,'source/weimer'];


%% Set plotting defaults (edit as required)
S = get(0,'ScreenSize');
set(0,'DefaultFigurePosition',[8,82,S(3:4)/2]);    % Figure position and size
set(0,'DefaultFigureColor',[1,1,1]);               % Figure background color
set(0,'DefaultTextColor',[0,0,0]);                 % Color for text and titles
set(0,'DefaultAxesColor',[1,1,1]);              % Color fill for plot
set(0,'DefaultAxesYColor',[0,0,0]);                % Color of y axis text and ticks
set(0,'DefaultAxesXColor',[0,0,0]);                % Color of x axis text and ticks
set(0,'DefaultAxesZColor',[0,0,0]);                % Color of z axis text and ticks
set(0,'DefaultTextFontSize',14)                    % Font size of titles
set(0,'DefaultAxesFontSize',14)                    % Font size of axes
set(0,'DefaultAxesFontName','arial');              % Axis Font
set(0,'DefaultTextFontName','arial');              % Axis Font


%% Paths to MAGIC sub-directories (please leave)
path([ROOT,'matlab/export_fig'],path);
path([ROOT,'matlab/gps'],path);
path([ROOT,'matlab/maths'],path);
path([ROOT,'matlab/medical'],path);
path([ROOT,'source/mex'],path);
path([ROOT,'matlab/mindi'],path);
path([ROOT,'matlab/m_map'],path);
path([ROOT,'matlab/utils'],path);

%% pharlap stuff
path('~/pharlap_4.2.0/',path);
path('~/pharlap_4.2.0/src/matlab/',path);
path('~/pharlap_4.2.0/mex/',path);
setenv('DIR_MODELS_REF_DAT', '~/pharlap_4.2.0/dat/')


%% Startup output (please leave)
V = ver('mindi');
fprintf('_______________________________________________________________________\n\n');
fprintf(' %s, version %s\n',V.Name, V.Version);
fprintf(' %s %s\n',V.Release, V.Date);
fprintf('_______________________________________________________________________\n\n');
fprintf('   Running startup from   : %s\n',which('startup.m'));
fprintf('   Working directory      : %s\n',pwd);
fprintf('   Mindi directory        : %s\n',ROOT);
fprintf('   Computer type and host : %s %s\n\n',computer,getenv('HOSTNAME'));
fprintf('_______________________________________________________________________\n');