WM-code/simTurnOffBetaIBwithTempInput.m at master · alexgelas/WM-code · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
filepath='turnOffBeta-IB-tempInput';

defaultParams; % call first to set parameters not set below

saveOutput=true;

numCellsBase=20;
numColumns=1;

fourTimesRS=true; % Have four times more RS than every other population?

gammaInput=0;
gammaFreq=40;
gammaJitter=0.2;

gammaInput2=1;
startGamma2=400;
endGamma2=800;

turnOffBeta=1;
inhibitoryPulse1Start=500;
inhibitoryPulse1Length=120;
turnOffTarget='IB';
turnOffAmp=1;

numSims=10;
clear('fullVall');
clear('fullSInputAll');

for sim=1:numSims
    sim
    networkSim;
    fullVall(:,:,sim)=fullV;
    fullSInputAll(:,:,sim)=fullSInput;
    rastFig=figure(sim);
    clf
    hold on
    rastergram;
    drawnow;
    fullFilepath=strcat(folder,'/',filepath);
    if saveOutput
        saveRastergram(folder,filepath,rastFig,sim)
        %saveas(rastFig,strcat(fullFilepath,'-rastergram-',int2str(sim)),'fig');
        %saveas(rastFig,strcat(fullFilepath,'-rastergram-',int2str(sim)),'png');
    end
end

if saveOutput
    save(strcat(fullFilepath,'.mat'),'fullVall','fullSInputAll','displayInputBeta','displayInputGamma','displayInputGamma2','inhibitoryPulse1Start','inhibitoryPulse1Length','turnOffTarget','turnOffAmp');
end

% fullFilepath=strcat(folder,'/',filepath);
% if saveRast
%     saveas(rastFig,fullFilepath,'fig');
%     saveas(rastFig,fullFilepath,'png');
% %    save(strcat(fullFilepath,'.mat'),'relativeMeanFreqs','relativeDevFreqs')
% end