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algbio
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Release
Build (and publish) python wheels
#123:
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release
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Merge pull request #143 from sebschmi/142-initialising-chaining-cost-…
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142 initialising chaining cost function takes too long
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#121:
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8m 5s
142-initialising-chaining-cost-function-takes-too-long
142-initialising-chaining-cost-function-takes-too-long
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Reduce amount of unnecessarily closed nodes in exact alignment.
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Merge pull request #141 from sebschmi/137-add-a-lower-bound-to-12-jum…
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Remove printlns.
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#118:
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#141
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8m 38s
137-add-a-lower-bound-to-12-jump-chaining-for-nodes-that-are-before-the-jump
137-add-a-lower-bound-to-12-jump-chaining-for-nodes-that-are-before-the-jump
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137 add a lower bound to 12 jump chaining for nodes that are before the jump
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#116:
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#140
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9m 24s
137-add-a-lower-bound-to-12-jump-chaining-for-nodes-that-are-before-the-jump
137-add-a-lower-bound-to-12-jump-chaining-for-nodes-that-are-before-the-jump
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Merge pull request #136 from sebschmi/135-chainalign-with-only-ts-anc…
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#115:
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Fix chains starting or ending with a TS.
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#114:
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7m 57s
135-chainalign-with-only-ts-anchors-does-not-work
135-chainalign-with-only-ts-anchors-does-not-work
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Fix chains starting or ending with a TS.
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#113:
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7m 34s
135-chainalign-with-only-ts-anchors-does-not-work
135-chainalign-with-only-ts-anchors-does-not-work
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Forbid chaining primary or secondary anchors directly.
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#112:
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Merge pull request #134 from sebschmi/131-compute-part-of-the-cost-fu…
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131 compute part of the cost function exactly
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#110:
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8m 16s
131-compute-part-of-the-cost-function-exactly
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Merge pull request #132 from sebschmi/130-suboptimal-alignment
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#109:
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130 suboptimal alignment
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#108:
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130-suboptimal-alignment
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Log chaining cost function initialisation duration.
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#107:
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Merge pull request #128 from sebschmi/121-create-custom-closed-list-f…
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121 create custom closed list for chaining in chainalign
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#105:
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#128
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8m 7s
121-create-custom-closed-list-for-chaining-in-chainalign
121-create-custom-closed-list-for-chaining-in-chainalign
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Choosing the popped heap node a bit more randomly.
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#104:
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Merge pull request #123 from sebschmi/120-create-custom-linear-heap-f…
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120 create custom linear heap for a
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#102:
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7m 42s
120-create-custom-linear-heap-for-a
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119 allow to use custom open and closed lists in generic a star
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#100:
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7m 24s
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Merge pull request #118 from sebschmi/117-reduce-amount-of-opened-nod…
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