From 177014136a716416b3b697ce31df365472066225 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Steffen=20M=C3=B6ller?= <steffen_moeller@gmx.de>
Date: Wed, 14 Aug 2019 18:21:38 +0200
Subject: [PATCH] Added dependency on commons-math3

Without that dependency, many build errors pop up:
```
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/MathUtil.java:32: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Gamma;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/MathUtil.java:33: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.FastMath;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:3: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Beta;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:4: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Erf;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:5: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Gamma;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:6: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.FastMath;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:7: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.MathUtils;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:9: error: package org.apache.commons.math3.special does not exist
import static org.apache.commons.math3.special.Beta.regularizedBeta;
                                              ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:9: error: static import only from classes and interfaces
import static org.apache.commons.math3.special.Beta.regularizedBeta;
^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:10: error: package org.apache.commons.math3.util does not exist
import static org.apache.commons.math3.util.CombinatoricsUtils.binomialCoefficientLog;
                                           ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:10: error: static import only from classes and interfaces
import static org.apache.commons.math3.util.CombinatoricsUtils.binomialCoefficientLog;
```
---
 build.gradle | 1 +
 1 file changed, 1 insertion(+)

diff --git a/build.gradle b/build.gradle
index 67fb0624..33461547 100644
--- a/build.gradle
+++ b/build.gradle
@@ -46,4 +46,5 @@ dependencies {
     compile 'com.milaboratory:milib:1.8.3'
     compile 'commons-io:commons-io:1.2'
     compile 'org.apache.commons:commons-lang3:3.4'
+    compile 'org.apache.commons:commons-math3:3.6.1'
 }