Skip to content

Cannot download DEP package #36

@ghost

Description

The downloaded binary packages are in
/var/folders/n0/hj3srgsx5sd4p8_8p8_5v8wm0000gn/T//RtmpOb525A/downloaded_packages

if (!requireNamespace("BiocManager", quietly=TRUE))

  • install.packages("BiocManager")

BiocManager::install("DEP")
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
CRAN: https://cran.rstudio.com/
Bioconductor version 3.18 (BiocManager 1.30.22), R 4.3.1 (2023-06-16)
Old packages: 'htmlwidgets', 'MSnbase'
Update all/some/none? [a/s/n]:
install.packages("DEP")
Update all/some/none? [a/s/n]:
a
trying URL 'https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.3/htmlwidgets_1.6.2.tgz'
Content type 'application/x-gzip' length 803888 bytes (785 KB)
==================================================
downloaded 785 KB

trying URL 'https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.3/MSnbase_2.27.1.tgz'
Content type 'application/x-gzip' length 8598247 bytes (8.2 MB)

downloaded 8.2 MB

The downloaded binary packages are in
/var/folders/n0/hj3srgsx5sd4p8_8p8_5v8wm0000gn/T//RtmpOb525A/downloaded_packages
Warning message:
package(s) not installed when version(s) same as or greater than current; use force = TRUE to re-install: 'DEP'

install.packages("DEP", force = TRUE)
Error in install.packages : Updating loaded packages

Restarting R session...

install.packages("DEP", force = TRUE)
Warning in install.packages :
package ‘DEP’ is not available for this version of R

A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions