From 792b5f281987cfcbeaec1dcc57b0c33f51659954 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 16 Mar 2026 20:06:35 +0000
Subject: [PATCH 1/2] [pre-commit.ci] pre-commit autoupdate
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

updates:
- [github.com/psf/black-pre-commit-mirror: 25.9.0 → 26.3.1](https://github.com/psf/black-pre-commit-mirror/compare/25.9.0...26.3.1)
- [github.com/pycqa/isort: 7.0.0 → 8.0.1](https://github.com/pycqa/isort/compare/7.0.0...8.0.1)
- [github.com/pylint-dev/pylint: v4.0.2 → v4.0.5](https://github.com/pylint-dev/pylint/compare/v4.0.2...v4.0.5)
---
 .pre-commit-config.yaml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)
 mode change 100755 => 100644 .pre-commit-config.yaml

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
old mode 100755
new mode 100644
index 37957a0..4a02dab
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -6,17 +6,17 @@ repos:
     -   id: end-of-file-fixer
     -   id: trailing-whitespace
 -   repo: https://github.com/psf/black-pre-commit-mirror
-    rev: 25.9.0
+    rev: 26.3.1
     hooks:
     -   id: black
 
 -   repo: https://github.com/pycqa/isort
-    rev: 7.0.0
+    rev: 8.0.1
     hooks:
     -   id: isort
 
 -   repo: https://github.com/pylint-dev/pylint
-    rev: v4.0.2
+    rev: v4.0.5
     hooks:
     -   id: pylint
         language: python

From ceaaed1c64dcb27242fc83adac5f59c4ba3ec242 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 16 Mar 2026 20:06:50 +0000
Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 bfi_dagster_project/resources/__init__.py | 6 ++----
 encoding_ui/app.py                        | 6 ++----
 2 files changed, 4 insertions(+), 8 deletions(-)

diff --git a/bfi_dagster_project/resources/__init__.py b/bfi_dagster_project/resources/__init__.py
index e3e2872..da2b5e5 100755
--- a/bfi_dagster_project/resources/__init__.py
+++ b/bfi_dagster_project/resources/__init__.py
@@ -159,8 +159,7 @@ def initialise_db(self, context: dg.AssetExecutionContext):
             cursor = conn.cursor()
 
             # Enable WAL mode for better concurrent access / busy time out / create table
-            cursor.execute(
-                """
+            cursor.execute("""
                 CREATE TABLE IF NOT EXISTS encoding_status (
                     process_id INTEGER PRIMARY KEY AUTOINCREMENT,
                     seq_id TEXT NOT NULL,
@@ -193,8 +192,7 @@ def initialise_db(self, context: dg.AssetExecutionContext):
                     project TEXT,
                     Instruction TEXT
                 )
-            """
-            )
+            """)
             context.log.info("Database initialized at: %s", self.filepath)
 
     @with_retries()
diff --git a/encoding_ui/app.py b/encoding_ui/app.py
index 6014da8..ab296a9 100755
--- a/encoding_ui/app.py
+++ b/encoding_ui/app.py
@@ -23,8 +23,7 @@ def index():
 
 DBASE = os.environ.get("DATABASE")
 CONNECT = sqlite3.connect(DBASE)
-CONNECT.execute(
-    """
+CONNECT.execute("""
                 CREATE TABLE IF NOT EXISTS encoding_status (
                     process_id INTEGER PRIMARY KEY AUTOINCREMENT,
                     seq_id TEXT NOT NULL,
@@ -57,8 +56,7 @@ def index():
                     project TEXT
                     Instruction TEXT
                 )
-            """
-)
+            """)
 
 
 @app.route("/reset_request", methods=["GET", "POST"])