From 9c1ae99956a0718b1aeb792346b6ac3f238ee9e4 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Wed, 3 Jun 2020 20:14:34 +0000 Subject: [PATCH] CompatHelper: bump compat for "CuArrays" to "2.2" --- Manifest.toml | 145 ++++++++++++++++++++++---------------- Project.toml | 2 +- docs/Manifest.toml | 169 +++++++++++++++++++++++++-------------------- 3 files changed, 178 insertions(+), 138 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index 2a098064cf8..d8b5253e60b 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -8,9 +8,9 @@ version = "0.5.0" [[Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "c88cfc7f9c1f9f8633cddf0b56e86302b70f64c5" +git-tree-sha1 = "fd04049c7dd78cfef0b06cdc1f0f181467655712" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "1.0.1" +version = "1.1.0" [[ArgParse]] deps = ["Logging", "TextWrap"] @@ -32,9 +32,9 @@ version = "3.5.0+3" [[ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "cee952c726065d21a6b9a0abe04e201debdffc20" +git-tree-sha1 = "89182776a99b69964e995cc2f1e37b5fc3476d56" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "0.3.0" +version = "0.3.4" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -47,14 +47,14 @@ version = "1.0.1" [[BinaryProvider]] deps = ["Libdl", "Logging", "SHA"] -git-tree-sha1 = "428e9106b1ff27593cbd979afac9b45b82372b8c" +git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058" uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" -version = "0.5.9" +version = "0.5.10" [[CEnum]] -git-tree-sha1 = "62847acab40e6855a9b5905ccb99c2b5cf6b3ebb" +git-tree-sha1 = "1b77a77c3b28e0b3f413f7567c9bb8dd9bdccd14" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.2.0" +version = "0.3.0" [[CFTime]] deps = ["Dates", "Printf"] @@ -64,33 +64,39 @@ version = "0.1.0" [[CLIMAParameters]] deps = ["Test"] -git-tree-sha1 = "7b80821bffd8702ccc2a712aef804e30b3bd7012" +git-tree-sha1 = "314f0bdd5817abb2df61cc8d3e857c496d421109" uuid = "6eacf6c3-8458-43b9-ae03-caf5306d3d53" -version = "0.1.3" +version = "0.1.6" [[CUDAapi]] deps = ["Libdl", "Logging"] -git-tree-sha1 = "d7ceadd8f821177d05b897c0517e94633db535fe" +git-tree-sha1 = "831b825d10104bd29e28f6da93312a976830717b" uuid = "3895d2a7-ec45-59b8-82bb-cfc6a382f9b3" -version = "3.1.0" +version = "4.0.0" [[CUDAdrv]] deps = ["CEnum", "CUDAapi", "Printf"] -git-tree-sha1 = "01e90fa34e25776bc7c8661183d4519149ebfe59" +git-tree-sha1 = "f56bbf18c86bcff7a961a32a4947a5abb2963a29" uuid = "c5f51814-7f29-56b8-a69c-e4d8f6be1fde" -version = "6.0.0" +version = "6.3.0" [[CUDAnative]] -deps = ["Adapt", "CEnum", "CUDAapi", "CUDAdrv", "DataStructures", "InteractiveUtils", "LLVM", "Libdl", "Printf", "TimerOutputs"] -git-tree-sha1 = "f86269ff60ebe082a2806ecbce51f3cadc68afe9" +deps = ["Adapt", "BinaryProvider", "CEnum", "CUDAapi", "CUDAdrv", "ExprTools", "GPUCompiler", "LLVM", "Libdl", "Pkg", "Printf"] +git-tree-sha1 = "ac86db2b05fdfec96b011e25a504ffe7476e8a68" uuid = "be33ccc6-a3ff-5ff2-a52e-74243cff1e17" -version = "2.10.2" +version = "3.1.0" [[Cassette]] git-tree-sha1 = "ff6f5109371926beb67ec3101be17d2c211e497d" uuid = "7057c7e9-c182-5462-911a-8362d720325c" version = "0.3.3" +[[CodeTracking]] +deps = ["InteractiveUtils", "UUIDs"] +git-tree-sha1 = "cab4da992adc0a64f63fa30d2db2fd8bec40cab4" +uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2" +version = "0.5.11" + [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] git-tree-sha1 = "ded953804d019afa9a3f98981d99b33e3db7b6da" @@ -98,10 +104,9 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.0" [[Combinatorics]] -deps = ["Polynomials"] -git-tree-sha1 = "8153f2c7cc4446958920242c4caa3dc0e061918f" +git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" -version = "1.0.1" +version = "1.0.2" [[CommonSubexpressions]] deps = ["Test"] @@ -139,11 +144,17 @@ git-tree-sha1 = "328154f6062b0053588295df6bffe22e1436597a" uuid = "c36e975a-824b-4404-a568-ef97ca766997" version = "1.1.0" +[[Cthulhu]] +deps = ["CodeTracking", "InteractiveUtils", "REPL", "UUIDs", "Unicode"] +git-tree-sha1 = "f3643e78353199d3097821e806348bd83f364155" +uuid = "f68482b8-f384-11e8-15f7-abe071a5a75f" +version = "1.1.1" + [[CuArrays]] -deps = ["AbstractFFTs", "Adapt", "CEnum", "CUDAapi", "CUDAdrv", "CUDAnative", "DataStructures", "GPUArrays", "Libdl", "LinearAlgebra", "MacroTools", "NNlib", "Printf", "Random", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "7fa1331a0e0cd10e43b94b280027bda45990cb63" +deps = ["AbstractFFTs", "Adapt", "CEnum", "CUDAapi", "CUDAdrv", "CUDAnative", "DataStructures", "GPUArrays", "Libdl", "LinearAlgebra", "MacroTools", "NNlib", "Pkg", "Printf", "Random", "Reexport", "Requires", "SparseArrays", "Statistics", "TimerOutputs"] +git-tree-sha1 = "870a4ac61e99c36f42d15e496fd290c841541d90" uuid = "3a865a2d-5b23-5a0f-bc46-62713ec82fae" -version = "1.7.3" +version = "2.2.0" [[DataAPI]] git-tree-sha1 = "176e23402d80e7743fc26c19c681bfb11246af32" @@ -152,9 +163,9 @@ version = "1.3.0" [[DataStructures]] deps = ["InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "6166ecfaf2b8bbf2b68d791bc1d54501f345d314" +git-tree-sha1 = "af6d9c86e191c917c2276fbede1137e8ea20157f" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.17.15" +version = "0.17.17" [[Dates]] deps = ["Printf"] @@ -182,9 +193,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"] -git-tree-sha1 = "c4ed10355637fcb0725dc6a27060f74df24f13cd" +git-tree-sha1 = "5ad1c36bff608560df500e93aaeb5b86b4ad45ba" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.23.2" +version = "0.23.3" [[DocStringExtensions]] deps = ["LibGit2", "Markdown", "Pkg", "Test"] @@ -217,9 +228,9 @@ version = "1.3.0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays"] -git-tree-sha1 = "5322d34d7600d3429665b37bcf7628dc602a28cc" +git-tree-sha1 = "44f561e293987ffc84272cd3d2b14b0b93123d63" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.8.8" +version = "0.8.10" [[ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "NaNMath", "Random", "SpecialFunctions", "StaticArrays"] @@ -229,9 +240,15 @@ version = "0.10.10" [[GPUArrays]] deps = ["AbstractFFTs", "Adapt", "LinearAlgebra", "Printf", "Random", "Serialization"] -git-tree-sha1 = "e756da6cee76a5f1436a05827fa8fdf3badc577f" +git-tree-sha1 = "d887693eb1bd5e1fd573262a978745481895ec7d" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "2.0.1" +version = "3.4.1" + +[[GPUCompiler]] +deps = ["Cthulhu", "DataStructures", "InteractiveUtils", "LLVM", "Libdl", "TimerOutputs"] +git-tree-sha1 = "5275aa268ecd09640b32560e1eae90c78816e4d1" +uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" +version = "0.2.0" [[GPUifyLoops]] deps = ["Cassette", "Requires", "StaticArrays"] @@ -259,9 +276,9 @@ version = "0.4.0" [[HTTP]] deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "fe31f4ff144392ad8176f5c7c03cca6ba320271c" +git-tree-sha1 = "ec87d5e2acbe1693789efbbe14f5ea7525758f71" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.14" +version = "0.8.15" [[IniFile]] deps = ["Test"] @@ -275,9 +292,9 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[Intervals]] deps = ["Dates", "Printf", "RecipesBase", "TimeZones"] -git-tree-sha1 = "5e9938f4dff72e5ed4c0f7fbe34b204cbabcf43a" +git-tree-sha1 = "11555ad4a66a93e2268364f2ea11139634f9dda3" uuid = "d8418881-c3e1-53bb-8760-2df7ec849ed5" -version = "1.1.0" +version = "1.2.0" [[JLD2]] deps = ["CodecZlib", "DataStructures", "FileIO", "Mmap", "Pkg", "Printf", "UUIDs"] @@ -292,22 +309,22 @@ uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.0" [[KernelAbstractions]] -deps = ["Adapt", "CUDAapi", "CUDAdrv", "CUDAnative", "Cassette", "MacroTools", "Requires", "StaticArrays"] -git-tree-sha1 = "9f5c41cec0e5443fc297d7b8b3799c55d8023b56" +deps = ["Adapt", "CUDAapi", "CUDAdrv", "CUDAnative", "Cassette", "MacroTools", "StaticArrays"] +git-tree-sha1 = "4bb6b6bc6db2033647c3d4305a34e93ba75a8f5d" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.2.3" +version = "0.2.4" [[LLVM]] deps = ["CEnum", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "93d2e1e960fe47db1a9015e86fad1d47cf67cf59" +git-tree-sha1 = "dd3f584c3dbefe39b2a8fbafa1a3b77e31e21255" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "1.4.1" +version = "1.5.1" [[LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "StaticArrays"] -git-tree-sha1 = "ca90f6dee7180e0af9b4604bccb33d949daebe1b" +git-tree-sha1 = "60f28207967d4445cc09fd08a594b2a35613376b" uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" -version = "0.16.8" +version = "0.16.11" [[LibGit2]] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" @@ -322,10 +339,10 @@ uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" version = "1.16.0+2" [[LightXML]] -deps = ["BinaryProvider", "Libdl"] -git-tree-sha1 = "be855e3c975b89746b09952407c156b5e4a33a1d" +deps = ["Libdl", "XML2_jll"] +git-tree-sha1 = "e129d9391168c677cd4800f5c0abb1ed8cb3794f" uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179" -version = "0.8.1" +version = "0.9.0" [[LinearAlgebra]] deps = ["Libdl"] @@ -333,9 +350,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[Literate]] deps = ["Base64", "JSON", "REPL"] -git-tree-sha1 = "7345603884151a5ef894fb85949a8a4faeae8e10" +git-tree-sha1 = "422133037d6dc5df9f9b97c2cb81fcd9e35ddffe" uuid = "98b081ad-f1c9-55d3-8b20-4c87d4299306" -version = "2.4.0" +version = "2.5.0" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -431,9 +448,9 @@ version = "0.9.12" [[Parsers]] deps = ["Dates", "Test"] -git-tree-sha1 = "72c3451932513427caffbd8bab15643ad693804b" +git-tree-sha1 = "f0abb338b4d00306500056a3fd44c221b8473ef2" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "1.0.3" +version = "1.0.4" [[Pkg]] deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Test", "UUIDs"] @@ -441,9 +458,9 @@ uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" [[Polynomials]] deps = ["Intervals", "LinearAlgebra", "RecipesBase"] -git-tree-sha1 = "19f1b9e3f27702309880b9ccb051287729af7db4" +git-tree-sha1 = "05f4b8b55595b86b252b28fb1e7c402fb4df98d2" uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" -version = "0.8.0" +version = "1.1.1" [[Printf]] deps = ["Unicode"] @@ -474,6 +491,12 @@ git-tree-sha1 = "54f8ceb165a0f6d083f0d12cb4996f5367c6edbc" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.0.1" +[[Reexport]] +deps = ["Pkg"] +git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0" +uuid = "189a3867-3050-52da-a836-e630ba90ab69" +version = "0.2.0" + [[Requires]] deps = ["UUIDs"] git-tree-sha1 = "d37400976e98018ee840e0ca4f9d20baa231dc6b" @@ -519,9 +542,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[SpecialFunctions]] deps = ["OpenSpecFun_jll"] -git-tree-sha1 = "e19b98acb182567bcb7b75bb5d9eedf3a3b5ec6c" +git-tree-sha1 = "d8d8b8a9f4119829410ecd706da4cc8594a1e020" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "0.10.0" +version = "0.10.3" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] @@ -541,9 +564,9 @@ version = "0.33.0" [[StatsFuns]] deps = ["Rmath", "SpecialFunctions"] -git-tree-sha1 = "f290ddd5fdedeadd10e961eb3f4d3340f09d030a" +git-tree-sha1 = "04a5a8e6ab87966b43f247920eab053fd5fdc925" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.4" +version = "0.9.5" [[SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -560,9 +583,9 @@ version = "1.0.1" [[TimeZones]] deps = ["Dates", "EzXML", "Mocking", "Printf", "RecipesBase", "Serialization", "Unicode"] -git-tree-sha1 = "07af1bd3226d644ca1a3235c93e7d0207ce4536a" +git-tree-sha1 = "db7bc2051d4c2e5f336409224df81485c00de6cb" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.1.1" +version = "1.2.0" [[TimerOutputs]] deps = ["Printf"] @@ -596,9 +619,9 @@ version = "1.2.0" [[WriteVTK]] deps = ["Base64", "CodecZlib", "LightXML", "Random", "TranscodingStreams"] -git-tree-sha1 = "2e762ea03dff8a5d1a5e5aeea2287bc56a4f1b04" +git-tree-sha1 = "46c5cc2f4e094eb57685f5fb0629b7e14b6ad18b" uuid = "64499a7a-5c06-52f2-abe2-ccb03c286192" -version = "1.4.1" +version = "1.6.0" [[XML2_jll]] deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] @@ -608,6 +631,6 @@ version = "2.9.9+4" [[Zlib_jll]] deps = ["Libdl", "Pkg"] -git-tree-sha1 = "2f6c3e15e20e036ee0a0965879b31442b7ec50fa" +git-tree-sha1 = "a2e0d558f6031002e380a90613b199e37a8565bf" uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.11+9" +version = "1.2.11+10" diff --git a/Project.toml b/Project.toml index cf608282678..f6ef4b05acd 100644 --- a/Project.toml +++ b/Project.toml @@ -47,7 +47,7 @@ CUDAdrv = "6.0" CUDAnative = "2.10, 3.0" Combinatorics = "1.0" Coverage = "1.0" -CuArrays = "1.7" +CuArrays = "1.7, 2.2" Distributions = "0.22, 0.23" DocStringExtensions = "0.8" DoubleFloats = "1.1" diff --git a/docs/Manifest.toml b/docs/Manifest.toml index f10b3b08e56..f41c8e9257c 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -8,9 +8,9 @@ version = "0.5.0" [[Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "c88cfc7f9c1f9f8633cddf0b56e86302b70f64c5" +git-tree-sha1 = "fd04049c7dd78cfef0b06cdc1f0f181467655712" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "1.0.1" +version = "1.1.0" [[ArgParse]] deps = ["Logging", "TextWrap"] @@ -32,9 +32,9 @@ version = "3.5.0+3" [[ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "cee952c726065d21a6b9a0abe04e201debdffc20" +git-tree-sha1 = "89182776a99b69964e995cc2f1e37b5fc3476d56" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "0.3.0" +version = "0.3.4" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -47,9 +47,9 @@ version = "1.0.1" [[BinaryProvider]] deps = ["Libdl", "Logging", "SHA"] -git-tree-sha1 = "428e9106b1ff27593cbd979afac9b45b82372b8c" +git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058" uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" -version = "0.5.9" +version = "0.5.10" [[Bzip2_jll]] deps = ["Libdl", "Pkg"] @@ -58,9 +58,9 @@ uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.6+2" [[CEnum]] -git-tree-sha1 = "62847acab40e6855a9b5905ccb99c2b5cf6b3ebb" +git-tree-sha1 = "1b77a77c3b28e0b3f413f7567c9bb8dd9bdccd14" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.2.0" +version = "0.3.0" [[CFTime]] deps = ["Dates", "Printf"] @@ -70,27 +70,27 @@ version = "0.1.0" [[CLIMAParameters]] deps = ["Test"] -git-tree-sha1 = "7b80821bffd8702ccc2a712aef804e30b3bd7012" +git-tree-sha1 = "314f0bdd5817abb2df61cc8d3e857c496d421109" uuid = "6eacf6c3-8458-43b9-ae03-caf5306d3d53" -version = "0.1.3" +version = "0.1.6" [[CUDAapi]] deps = ["Libdl", "Logging"] -git-tree-sha1 = "d7ceadd8f821177d05b897c0517e94633db535fe" +git-tree-sha1 = "831b825d10104bd29e28f6da93312a976830717b" uuid = "3895d2a7-ec45-59b8-82bb-cfc6a382f9b3" -version = "3.1.0" +version = "4.0.0" [[CUDAdrv]] deps = ["CEnum", "CUDAapi", "Printf"] -git-tree-sha1 = "01e90fa34e25776bc7c8661183d4519149ebfe59" +git-tree-sha1 = "f56bbf18c86bcff7a961a32a4947a5abb2963a29" uuid = "c5f51814-7f29-56b8-a69c-e4d8f6be1fde" -version = "6.0.0" +version = "6.3.0" [[CUDAnative]] -deps = ["Adapt", "CEnum", "CUDAapi", "CUDAdrv", "DataStructures", "InteractiveUtils", "LLVM", "Libdl", "Printf", "TimerOutputs"] -git-tree-sha1 = "f86269ff60ebe082a2806ecbce51f3cadc68afe9" +deps = ["Adapt", "BinaryProvider", "CEnum", "CUDAapi", "CUDAdrv", "ExprTools", "GPUCompiler", "LLVM", "Libdl", "Pkg", "Printf"] +git-tree-sha1 = "ac86db2b05fdfec96b011e25a504ffe7476e8a68" uuid = "be33ccc6-a3ff-5ff2-a52e-74243cff1e17" -version = "2.10.2" +version = "3.1.0" [[Cassette]] git-tree-sha1 = "ff6f5109371926beb67ec3101be17d2c211e497d" @@ -99,9 +99,9 @@ version = "0.3.3" [[CategoricalArrays]] deps = ["DataAPI", "Future", "JSON", "Missings", "Printf", "Statistics", "Unicode"] -git-tree-sha1 = "df774d7e905ca391178f0abc67f4fa5d3ff4ef12" +git-tree-sha1 = "a6c17353ee38ddab30e73dcfaa1107752de724ec" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.8.0" +version = "0.8.1" [[ClimateMachine]] deps = ["ArgParse", "CLIMAParameters", "CUDAapi", "CUDAdrv", "CUDAnative", "Combinatorics", "Coverage", "CuArrays", "Dates", "DelimitedFiles", "Distributions", "DocStringExtensions", "DoubleFloats", "FileIO", "ForwardDiff", "GPUifyLoops", "GaussQuadrature", "JLD2", "KernelAbstractions", "LazyArrays", "LinearAlgebra", "Literate", "Logging", "MPI", "NCDatasets", "OrderedCollections", "Pkg", "Printf", "Random", "RootSolvers", "SpecialFunctions", "StaticArrays", "Statistics", "WriteVTK"] @@ -109,6 +109,12 @@ path = ".." uuid = "777c4786-024f-11e9-21a3-85d5d4106250" version = "0.1.0" +[[CodeTracking]] +deps = ["InteractiveUtils", "UUIDs"] +git-tree-sha1 = "cab4da992adc0a64f63fa30d2db2fd8bec40cab4" +uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2" +version = "0.5.11" + [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] git-tree-sha1 = "ded953804d019afa9a3f98981d99b33e3db7b6da" @@ -129,15 +135,14 @@ version = "0.10.3" [[Colors]] deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Reexport"] -git-tree-sha1 = "2fdeb981ebcf52cd800ddb6a0aa5eac34153552d" +git-tree-sha1 = "db9c215e2d92379d341e40dd1d5be893af2bfeb2" uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" -version = "0.12.0" +version = "0.12.1" [[Combinatorics]] -deps = ["Polynomials"] -git-tree-sha1 = "8153f2c7cc4446958920242c4caa3dc0e061918f" +git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" -version = "1.0.1" +version = "1.0.2" [[CommonSubexpressions]] deps = ["Test"] @@ -147,9 +152,9 @@ version = "0.2.0" [[Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "fecfed095803b86cc06fd7ee09d3d2c98fad4dac" +git-tree-sha1 = "48c20c43e157c6eab6cf88326504ec042b05e456" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.9.0" +version = "3.10.0" [[CompilerSupportLibraries_jll]] deps = ["Libdl", "Pkg"] @@ -171,9 +176,9 @@ version = "0.2.0" [[Contour]] deps = ["StaticArrays"] -git-tree-sha1 = "6d56f927b33d3820561b8f89d7de311718683846" +git-tree-sha1 = "0b17db36e7e03f8437e0d1f55aea3e4a60c74353" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.5.2" +version = "0.5.3" [[Coverage]] deps = ["CoverageTools", "HTTP", "JSON", "LibGit2", "MbedTLS"] @@ -187,11 +192,17 @@ git-tree-sha1 = "328154f6062b0053588295df6bffe22e1436597a" uuid = "c36e975a-824b-4404-a568-ef97ca766997" version = "1.1.0" +[[Cthulhu]] +deps = ["CodeTracking", "InteractiveUtils", "REPL", "UUIDs", "Unicode"] +git-tree-sha1 = "f3643e78353199d3097821e806348bd83f364155" +uuid = "f68482b8-f384-11e8-15f7-abe071a5a75f" +version = "1.1.1" + [[CuArrays]] -deps = ["AbstractFFTs", "Adapt", "CEnum", "CUDAapi", "CUDAdrv", "CUDAnative", "DataStructures", "GPUArrays", "Libdl", "LinearAlgebra", "MacroTools", "NNlib", "Printf", "Random", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "7fa1331a0e0cd10e43b94b280027bda45990cb63" +deps = ["AbstractFFTs", "Adapt", "CEnum", "CUDAapi", "CUDAdrv", "CUDAnative", "DataStructures", "GPUArrays", "Libdl", "LinearAlgebra", "MacroTools", "NNlib", "Pkg", "Printf", "Random", "Reexport", "Requires", "SparseArrays", "Statistics", "TimerOutputs"] +git-tree-sha1 = "870a4ac61e99c36f42d15e496fd290c841541d90" uuid = "3a865a2d-5b23-5a0f-bc46-62713ec82fae" -version = "1.7.3" +version = "2.2.0" [[DataAPI]] git-tree-sha1 = "176e23402d80e7743fc26c19c681bfb11246af32" @@ -200,15 +211,15 @@ version = "1.3.0" [[DataFrames]] deps = ["CategoricalArrays", "Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "Missings", "PooledArrays", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "1b4d832288e2d919eeaccdf1d9af7a8a57d773d6" +git-tree-sha1 = "02f08ae77249b7f6d4186b081a016fb7454c616f" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "0.21.0" +version = "0.21.2" [[DataStructures]] deps = ["InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "6166ecfaf2b8bbf2b68d791bc1d54501f345d314" +git-tree-sha1 = "af6d9c86e191c917c2276fbede1137e8ea20157f" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.17.15" +version = "0.17.17" [[DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -241,9 +252,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"] -git-tree-sha1 = "c4ed10355637fcb0725dc6a27060f74df24f13cd" +git-tree-sha1 = "5ad1c36bff608560df500e93aaeb5b86b4ad45ba" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.23.2" +version = "0.23.3" [[DocStringExtensions]] deps = ["LibGit2", "Markdown", "Pkg", "Test"] @@ -303,9 +314,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays"] -git-tree-sha1 = "5322d34d7600d3429665b37bcf7628dc602a28cc" +git-tree-sha1 = "44f561e293987ffc84272cd3d2b14b0b93123d63" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.8.8" +version = "0.8.10" [[FixedPointNumbers]] git-tree-sha1 = "3ba9ea634d4c8b289d590403b4a06f8e227a6238" @@ -336,9 +347,15 @@ uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[GPUArrays]] deps = ["AbstractFFTs", "Adapt", "LinearAlgebra", "Printf", "Random", "Serialization"] -git-tree-sha1 = "e756da6cee76a5f1436a05827fa8fdf3badc577f" +git-tree-sha1 = "d887693eb1bd5e1fd573262a978745481895ec7d" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "2.0.1" +version = "3.4.1" + +[[GPUCompiler]] +deps = ["Cthulhu", "DataStructures", "InteractiveUtils", "LLVM", "Libdl", "TimerOutputs"] +git-tree-sha1 = "5275aa268ecd09640b32560e1eae90c78816e4d1" +uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" +version = "0.2.0" [[GPUifyLoops]] deps = ["Cassette", "Requires", "StaticArrays"] @@ -378,9 +395,9 @@ version = "0.8.3" [[HTTP]] deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "fe31f4ff144392ad8176f5c7c03cca6ba320271c" +git-tree-sha1 = "ec87d5e2acbe1693789efbbe14f5ea7525758f71" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.14" +version = "0.8.15" [[IniFile]] deps = ["Test"] @@ -394,9 +411,9 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[Intervals]] deps = ["Dates", "Printf", "RecipesBase", "TimeZones"] -git-tree-sha1 = "5e9938f4dff72e5ed4c0f7fbe34b204cbabcf43a" +git-tree-sha1 = "11555ad4a66a93e2268364f2ea11139634f9dda3" uuid = "d8418881-c3e1-53bb-8760-2df7ec849ed5" -version = "1.1.0" +version = "1.2.0" [[InvertedIndices]] deps = ["Test"] @@ -422,10 +439,10 @@ uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.0" [[KernelAbstractions]] -deps = ["Adapt", "CUDAapi", "CUDAdrv", "CUDAnative", "Cassette", "MacroTools", "Requires", "StaticArrays"] -git-tree-sha1 = "9f5c41cec0e5443fc297d7b8b3799c55d8023b56" +deps = ["Adapt", "CUDAapi", "CUDAdrv", "CUDAnative", "Cassette", "MacroTools", "StaticArrays"] +git-tree-sha1 = "4bb6b6bc6db2033647c3d4305a34e93ba75a8f5d" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.2.3" +version = "0.2.4" [[LAME_jll]] deps = ["Libdl", "Pkg"] @@ -435,9 +452,9 @@ version = "3.100.0+1" [[LLVM]] deps = ["CEnum", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "93d2e1e960fe47db1a9015e86fad1d47cf67cf59" +git-tree-sha1 = "dd3f584c3dbefe39b2a8fbafa1a3b77e31e21255" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "1.4.1" +version = "1.5.1" [[LaTeXStrings]] git-tree-sha1 = "de44b395389b84fd681394d4e8d39ef14e3a2ea8" @@ -446,9 +463,9 @@ version = "1.1.0" [[LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "StaticArrays"] -git-tree-sha1 = "ca90f6dee7180e0af9b4604bccb33d949daebe1b" +git-tree-sha1 = "60f28207967d4445cc09fd08a594b2a35613376b" uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" -version = "0.16.8" +version = "0.16.11" [[LibGit2]] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" @@ -469,10 +486,10 @@ uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" version = "1.16.0+2" [[LightXML]] -deps = ["BinaryProvider", "Libdl"] -git-tree-sha1 = "be855e3c975b89746b09952407c156b5e4a33a1d" +deps = ["Libdl", "XML2_jll"] +git-tree-sha1 = "e129d9391168c677cd4800f5c0abb1ed8cb3794f" uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179" -version = "0.8.1" +version = "0.9.0" [[LinearAlgebra]] deps = ["Libdl"] @@ -480,9 +497,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[Literate]] deps = ["Base64", "JSON", "REPL"] -git-tree-sha1 = "7345603884151a5ef894fb85949a8a4faeae8e10" +git-tree-sha1 = "422133037d6dc5df9f9b97c2cb81fcd9e35ddffe" uuid = "98b081ad-f1c9-55d3-8b20-4c87d4299306" -version = "2.4.0" +version = "2.5.0" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -601,9 +618,9 @@ version = "0.9.12" [[Parsers]] deps = ["Dates", "Test"] -git-tree-sha1 = "72c3451932513427caffbd8bab15643ad693804b" +git-tree-sha1 = "f0abb338b4d00306500056a3fd44c221b8473ef2" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "1.0.3" +version = "1.0.4" [[Pkg]] deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Test", "UUIDs"] @@ -616,22 +633,22 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "2.0.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport"] -git-tree-sha1 = "44de63b180da00d30dcfbe467dd62bd3cbc87af0" +deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "ce26340b638fdf02965a6a65aa7916d40a8c774c" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.0.2" +version = "1.0.4" [[Plots]] deps = ["Base64", "Contour", "Dates", "FFMPEG", "FixedPointNumbers", "GR", "GeometryTypes", "JSON", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "Requires", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs"] -git-tree-sha1 = "10cb3f90cf3412ec9fcc9ce8b6a7770a00b82f31" +git-tree-sha1 = "a784969eee5bfba15d151c260d0f1d724e625592" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.2.2" +version = "1.3.6" [[Polynomials]] deps = ["Intervals", "LinearAlgebra", "RecipesBase"] -git-tree-sha1 = "19f1b9e3f27702309880b9ccb051287729af7db4" +git-tree-sha1 = "05f4b8b55595b86b252b28fb1e7c402fb4df98d2" uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" -version = "0.8.0" +version = "1.1.1" [[PooledArrays]] deps = ["DataAPI"] @@ -741,9 +758,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[SpecialFunctions]] deps = ["OpenSpecFun_jll"] -git-tree-sha1 = "e19b98acb182567bcb7b75bb5d9eedf3a3b5ec6c" +git-tree-sha1 = "d8d8b8a9f4119829410ecd706da4cc8594a1e020" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "0.10.0" +version = "0.10.3" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] @@ -763,9 +780,9 @@ version = "0.33.0" [[StatsFuns]] deps = ["Rmath", "SpecialFunctions"] -git-tree-sha1 = "f290ddd5fdedeadd10e961eb3f4d3340f09d030a" +git-tree-sha1 = "04a5a8e6ab87966b43f247920eab053fd5fdc925" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.4" +version = "0.9.5" [[SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -794,9 +811,9 @@ version = "1.0.1" [[TimeZones]] deps = ["Dates", "EzXML", "Mocking", "Printf", "RecipesBase", "Serialization", "Unicode"] -git-tree-sha1 = "07af1bd3226d644ca1a3235c93e7d0207ce4536a" +git-tree-sha1 = "db7bc2051d4c2e5f336409224df81485c00de6cb" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.1.1" +version = "1.2.0" [[TimerOutputs]] deps = ["Printf"] @@ -830,9 +847,9 @@ version = "1.2.0" [[WriteVTK]] deps = ["Base64", "CodecZlib", "LightXML", "Random", "TranscodingStreams"] -git-tree-sha1 = "2e762ea03dff8a5d1a5e5aeea2287bc56a4f1b04" +git-tree-sha1 = "46c5cc2f4e094eb57685f5fb0629b7e14b6ad18b" uuid = "64499a7a-5c06-52f2-abe2-ccb03c286192" -version = "1.4.1" +version = "1.6.0" [[XML2_jll]] deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] @@ -842,9 +859,9 @@ version = "2.9.9+4" [[Zlib_jll]] deps = ["Libdl", "Pkg"] -git-tree-sha1 = "2f6c3e15e20e036ee0a0965879b31442b7ec50fa" +git-tree-sha1 = "a2e0d558f6031002e380a90613b199e37a8565bf" uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.11+9" +version = "1.2.11+10" [[libass_jll]] deps = ["Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "Libdl", "Pkg", "Zlib_jll"]