diff --git a/.gitignore b/.gitignore index f524609..2d14a36 100755 --- a/.gitignore +++ b/.gitignore @@ -1,6 +1,6 @@ # Stuff added after intialization -icons/ + notes.txt # Taking this gitignore from https://github.com/data-8/textbook/blob/main/.gitignore as a starting point. diff --git a/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_1.svg b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_1.svg new file mode 100644 index 0000000..e263fb5 --- /dev/null +++ b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_1.svg @@ -0,0 +1 @@ +ABCDE \ No newline at end of file diff --git a/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_2.svg b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_2.svg new file mode 100644 index 0000000..98980d7 --- /dev/null +++ b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_2.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_3.svg b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_3.svg new file mode 100644 index 0000000..15b3675 --- /dev/null +++ b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_3.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_4.svg b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_4.svg new file mode 100644 index 0000000..bc9076a --- /dev/null +++ b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_4.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_5.svg b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_5.svg new file mode 100644 index 0000000..4b0beaf --- /dev/null +++ b/icons/SIM_tutorials/tutorial_2/Sim_tutorial2_5.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic1.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic1.svg new file mode 100755 index 0000000..a70ce5c --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic1.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic2.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic2.svg new file mode 100755 index 0000000..305f164 --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic2.svg @@ -0,0 +1 @@ +12345 \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic3.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic3.svg new file mode 100755 index 0000000..a4ef4d3 --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic3.svg @@ -0,0 +1 @@ +12345 \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic4.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic4.svg new file mode 100755 index 0000000..0659006 --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic4.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic5.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic5.svg new file mode 100755 index 0000000..342e805 --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic5.svg @@ -0,0 +1 @@ +12345 \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic6.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic6.svg new file mode 100755 index 0000000..7602f6c --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic6.svg @@ -0,0 +1 @@ +12345 \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic7.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic7.svg new file mode 100755 index 0000000..038486c --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic7.svg @@ -0,0 +1 @@ +12345 \ No newline at end of file diff --git a/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic8.svg b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic8.svg new file mode 100755 index 0000000..d0410da --- /dev/null +++ b/icons/TM_tutorials/tutorial_1/TM_tutorial_1_pic8.svg @@ -0,0 +1 @@ +12345 \ No newline at end of file diff --git a/icons/cisTEM.png b/icons/cisTEM.png new file mode 100755 index 0000000..d77a947 Binary files /dev/null and b/icons/cisTEM.png differ diff --git a/icons/cisTEM_logo_dev.png b/icons/cisTEM_logo_dev.png new file mode 100644 index 0000000..167f391 Binary files /dev/null and b/icons/cisTEM_logo_dev.png differ diff --git a/icons/docs_icon.svg b/icons/docs_icon.svg new file mode 100755 index 0000000..009f915 --- /dev/null +++ b/icons/docs_icon.svg @@ -0,0 +1 @@ +priorsSPANucleusERIn situ particle detection00.20.40.60.811.21.41.61.82Radial Distance in Angstrom00.20.40.60.811.21.41.61.82Scattering potential22𝜋𝑚0𝑎𝑖4𝜋𝑏𝑖+𝐵32 𝑑𝑥𝑗exp−4𝜋2𝑥𝑗𝑥𝑜𝑗2𝑏𝑖+𝐵0𝑗𝑖SimulationTomographySoftware Development \ No newline at end of file diff --git a/icons/docs_icon2.svg b/icons/docs_icon2.svg new file mode 100755 index 0000000..1d94a69 --- /dev/null +++ b/icons/docs_icon2.svg @@ -0,0 +1 @@ +SPANucleusERIn situ particle detection22𝜋𝑚0𝑎𝑖4𝜋𝑏𝑖+𝐵32Τ𝑑𝑥𝑗exp4𝜋2𝑥𝑗𝑥𝑜𝑗2𝑏𝑖+𝐵0𝑗𝑖SimulationTomographySoftware DevelopmentTutorials ………. guided toursReference…….. oouseof cisTEMlibraryDiscussions….. understanding the “why”How-To………... detailed recipes \ No newline at end of file diff --git a/icons/gitflow.svg b/icons/gitflow.svg new file mode 100755 index 0000000..7774eed --- /dev/null +++ b/icons/gitflow.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/icons/gitflow2.png b/icons/gitflow2.png new file mode 100755 index 0000000..3da9486 Binary files /dev/null and b/icons/gitflow2.png differ diff --git a/icons/gitflow2.svg b/icons/gitflow2.svg new file mode 100755 index 0000000..47e09d4 --- /dev/null +++ b/icons/gitflow2.svg @@ -0,0 +1,14542 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + <date/time> + + + + + + <footer> + + + + + + <number> + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + maintainers + + + + + + developers + + + + + + + + + \ No newline at end of file diff --git a/icons/gitfork.png b/icons/gitfork.png new file mode 100755 index 0000000..9e25ef1 Binary files /dev/null and b/icons/gitfork.png differ diff --git a/icons/gitfork2.png b/icons/gitfork2.png new file mode 100755 index 0000000..31f0a20 Binary files /dev/null and b/icons/gitfork2.png differ