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<section id="thetis-publications">
<h1>Thetis publications<a class="headerlink" href="#thetis-publications" title="Link to this heading">¶</a></h1>
<section id="citing-thetis">
<h2>Citing Thetis<a class="headerlink" href="#citing-thetis" title="Link to this heading">¶</a></h2>
<p>If you publish results obtained with Thetis, please cite the <a class="reference external" href="https://doi.org/10.5194/gmd-11-4359-2018">2018 GMD paper</a>.
Also see <a class="reference external" href="https://firedrakeproject.org/citing.html">instructions for citing Firedrake</a>.</p>
</section>
<section id="id1">
<h2>2025<a class="headerlink" href="#id1" title="Link to this heading">¶</a></h2>
<p>Pappas, K., Nguyen, C. Q., Zilakos, I., Beevers L. and Angeloudis A.:
On the economic feasibility of tidal range power plants,
<em>Proc. R. Soc. A.</em>, 481:20230867,
doi: <a class="reference external" href="http://doi.org/10.1098/rspa.2023.0867">10.1098/rspa.2023.0867</a>, 2025.</p>
<p>Zhang, C., Zhang, Y., Zhang, J., Cheng, X., Lin, X., Wu, C. and Ding, Z.:
Two-Objective Optimization of Tidal Array Micro-Sitting Accounting for Yaw Angle Effects,
<em>J. Mar. Sci. Eng</em>, 13:1210,
doi: <a class="reference external" href="https://doi.org/10.3390/jmse13071210">10.3390/jmse13071210</a>, 2025.</p>
<p>Jordan, C., Coles, D., Johnson, F. and Angeloudis, A.:
On tidal array layout sensitivity to regional hydrodynamics representation,
<em>International Marine Energy Journal</em>, 8(2):227–236,
doi: <a class="reference external" href="https://doi.org/10.36688/imej.8.227-236">10.36688/imej.8.227-236</a>, 2025.</p>
</section>
<section id="id2">
<h2>2024<a class="headerlink" href="#id2" title="Link to this heading">¶</a></h2>
<p>Wallwork, J.G., Angeloudis, A., Barral, N., Mackie, L., Kramer S. C. and Piggott, M. D.:
Tidal turbine array modelling using goal-oriented mesh adaptation,
<em>J. Ocean Eng. Mar. Energy</em>, 10:193–216,
doi: <a class="reference external" href="https://doi.org/10.1007/s40722-023-00307-9">10.1007/s40722-023-00307-9</a>, 2024</p>
<p>Old, C., Sellar, B. and Angeloudis, A.:
Iterative dynamics-based mesh discretisation for multi-scale coastal ocean modelling,
<em>J. Ocean Eng. Mar. Energy</em>, 10:313–334,
doi: <a class="reference external" href="https://doi.org/10.1007/s40722-024-00314-4">10.1007/s40722-024-00314-4</a>, 2024</p>
<p>Alday, M. and Lavidas, G.:
Assessing the Tidal Stream Resource for energy extraction in The Netherlands,
<em>Renewable Energy</em>, 220:119683,
doi: <a class="reference external" href="https://doi.org/10.1016/j.renene.2023.119683">10.1016/j.renene.2023.119683</a>, 2024.</p>
<p>Fragkou, A. K., Old, C., Venugopal, V. and Angeloudis, A.:
Thetis-SWAN: A Python-interfaced wave–current interactions coupled system,
<em>Environmental Modelling & Software</em>, 177:106034,
doi: <a class="reference external" href="https://doi.org/10.1016/j.envsoft.2024.106034">10.1016/j.envsoft.2024.106034</a>, 2024.</p>
<p>Smith, H. A.:
Modelling the impacts of tropical cyclones on coral cover across the Great Barrier Reef,
<em>MSc by Research thesis</em>: University of York.
eprint ID: <a class="reference external" href="https://etheses.whiterose.ac.uk/id/eprint/36909/">etheses.whiterose.ac.uk:36909</a>, 2024.</p>
<p>Zhang, C. Cheng, X., Angeloudis, A., Kramer, S. C., Wu, C., Chen, Y. and Piggott, M. D.:
Economics-constrained tidal turbine array layout optimisation at the Putuoshan–Hulu island waterway,
<em>Ocean Engineering</em>, 314(1):119618,
doi: <a class="reference external" href="https://doi.org/10.1016/j.oceaneng.2024.119618">10.1016/j.oceaneng.2024.119618</a>, 2024.</p>
<p>Patel, M. D., Smyth, A. S. M., Angeloudis, A. and Adcock T. A. A.:
Implementation of homogeneous and heterogeneous tidal arrays in the Inner Sound of the Pentland Firth,
<em>J. Ocean Eng. Mar. Energy</em>, 10:731–747,
doi: <a class="reference external" href="https://doi.org/10.1007/s40722-024-00342-0">10.1007/s40722-024-00342-0</a>, 2024.</p>
<p>Jordan, C., Agirre, J. and Angeloudis, A.:
Objective representative flow field selection for tidal array layout design,
<em>Renewable Energy</em>, 236:121381,
doi: <a class="reference external" href="https://doi.org/10.1016/j.renene.2024.121381">10.1016/j.renene.2024.121381</a>, 2024.</p>
</section>
<section id="id3">
<h2>2023<a class="headerlink" href="#id3" title="Link to this heading">¶</a></h2>
<p>Wallwork, J. G., Angeloudis, A., Barral, N., Mackie, L., Kramer, S. C. and Piggott, M. D.:
Tidal turbine array modelling using goal-oriented mesh adaptation,
<em>Journal of Ocean Engineering and Marine Energy</em>,
doi: <a class="reference external" href="https://doi.org/10.1007/s40722-023-00307-9">10.1007/s40722-023-00307-9</a>, 2023.</p>
<p>Kärnä, T., Wallwork, J. G. and Kramer, S. C.:
Adjoint-based optimization of a regional water elevation model,
<em>Journal of Advances in Modeling Earth Systems</em>,
doi: <a class="reference external" href="https://doi.org/10.1029/2022MS003169">10.1029/2022MS003169</a>, 2023.</p>
<p>Woodroffe, S., Hill, J., Bustamante-Fernandez, E., Lloyd, JM., Luff, J., Richards, S. and Shennan, I:
On the varied impact of the Storegga tsunami in northwest Scotland,
<em>Journal of Quaternary Science</em>,
doi: <a class="reference external" href="https://doi.org/10.1002/jqs.3539">10.1002/jqs.3539</a>, 2023.</p>
<p>Hill, J., Rush, G., Peakall, J., Johnson, M., Hodson, L. and Barlow, N.L.M.,
Bowman, E.T., Gehrels, W.R., Hodgson, D.M., Kesserwani, G:
Resolving tsunami wave dynamics: integrating sedimentology and numerical modelling,
<em>The Depositional Record</em>
doi: <a class="reference external" href="https://doi.org/10.1002/dep2.247">10.1002/dep2.247</a>, 2023.</p>
<p>Zhang, C., Zhang, J., Angeloudis, A., Zhou, Y., Kramer, S.C. and Piggott, M.D.:
Physical Modelling of Tidal Stream Turbine Wake Structures under Yaw Conditions,
<em>Energies</em>, 16:1742,
doi: <a class="reference external" href="https://doi.org/10.3390/en16041742">10.3390/en16041742</a>, 2023.</p>
<p>Fragkou, A. K., Old, C., Venugopal, V. and Angeloudis, A.:
Benchmarking a two-way coupled coastal wave–current hydrodynamics model,
<em>Ocean Modelling</em>, 183:102193,
doi: <a class="reference external" href="https://doi.org/10.1016/j.ocemod.2023.102193">10.1016/j.ocemod.2023.102193</a>, 2023.</p>
<p>Fanous, M., Daneshkhah, A., Eden, J.M., Remesan, R. and Palade, V.:
Hydro-morphodynamic modelling of mangroves imposed by tidal waves using finite element discontinuous Galerkin method,
<em>Coastal Engineering</em>, 182:104303,
doi: <a class="reference external" href="https://doi.org/10.1016/j.coastaleng.2023.104303">10.1016/j.coastaleng.2023.104303</a>, 2023.</p>
</section>
<section id="id5">
<h2>2022<a class="headerlink" href="#id5" title="Link to this heading">¶</a></h2>
<p>Lee, K.C., Webster, J.M., Salles, T., Mawson, E.E. and Hill, J.:
Tidal dynamics drive ooid formation in the Capricorn Channel since the Last Glacial Maximum,
<em>Marine Geology</em>, 454:106944,
doi:<a class="reference external" href="https://doi.org/10.1016/j.margeo.2022.106944">10.1016/j.margeo.2022.106944</a>, 2022.</p>
<p>Mawson, E.E., Lee, K.C. and Hill, J.:
Sea level rise and the Great Barrier Reef: the future implications on reef tidal dynamics,
<em>Journal of Geophysical Research: Oceans</em>, 127:e2021JC017823,
doi:<a class="reference external" href="https://doi.org/10.1029/2021JC017823">10.1029/2021JC017823</a>, 2022.</p>
<p>Wallwork, J. G., Barral, N., Ham, D. A. and Piggott, M. D.:
Goal-Oriented Error Estimation and Mesh Adaptation for Tracer Transport Modelling,
<em>Computer-Aided Design</em>, 145:103187,
doi:<a class="reference external" href="https://doi.org/10.1016/j.cad.2021.103187">10.1016/j.cad.2021.103187</a>, 2022.</p>
<p>Clare, M. C. A., Wallwork, J. G., Kramer, S. C., Weller, H., Cotter, C. J. and Piggott, M. D.:
Multi-scale hydro-morphodynamic modelling using mesh movement methods,
<em>GEM - International Journal on Geomathematics</em>, 13:1,
doi:<a class="reference external" href="https://doi.org/10.1007/s13137-021-00191-1">10.1007/s13137-021-00191-1</a>, 2022.</p>
<p>Clare, M. C. A., Kramer, S. C., Cotter, C. J. and Piggott, M. D.:
Calibration, inversion and sensitivity analysis for hydro-morphodynamic models through the application of adjoint methods,
<em>Computers & Geosciences</em> 163, p. 105104,
doi: <a class="reference external" href="https://doi.org/10.1016/j.cageo.2022.105104">10.1016/j.cageo.2022.105104</a>, 2022.</p>
<p>Pan, W., Kramer, S. C., Piggott, M. D. and Xiping, Y.:
Modeling landslide generated waves using the discontinuous finite element method,
<em>International Journal for Numerical Methods in Fluids</em>, 94 (8), pp. 1298-1330,
doi: <a class="reference external" href="https://doi.org/10.1002/fld.5090">10.1002/fld.5090</a>, 2022.</p>
<p>Zhang, C., Kramer, S. C., Angeloudis, A., Zhang, J., Lin, X. and Piggott, M. D.:
Improving tidal turbine array performance through the optimisation of layout and yaw angles,
<em>International Marine Energy Journal</em> 5.3, pp. 273–280,
doi: <a class="reference external" href="https://doi.org/10.36688/imej.5.273-280">10.36688/imej.5.273-280</a>, 2022</p>
<p>Zhang, J., Zhang, C., Angeloudis, A., Kramer, S. C., He, R. and Piggott, M. D.:
Interactions between tidal stream turbine arrays and their hydrodynamic impact around Zhoushan Island, China,
<em>Ocean Engineering</em> 246, p. 110431,
doi: <a class="reference external" href="https://doi.org/10.1016/j.oceaneng.2021.110431">10.1016/j.oceaneng.2021.110431</a>, 2022</p>
<p>Jordan, C., Dundovic, D., Fragkou, A.K., Deskos, G., Coles, D.S., Piggott, M.D. and Angeloudis, A.:
Combining shallow-water and analytical wake models for tidal array micro-siting,
<em>J. Ocean Eng. Mar. Energy</em> 8:193–215,
doi: <a class="reference external" href="https://doi.org/10.1007/s40722-022-00225-2">10.1007/s40722-022-00225-2</a>, 2022.</p>
</section>
<section id="id6">
<h2>2021<a class="headerlink" href="#id6" title="Link to this heading">¶</a></h2>
<p>Fofonova, V., Kärnä, T., Klingbeil, K., Androsov, A., Kuznetsov, I., Sidorenko, D., Danilov, S., Burchard, H. and Wiltshire, K. H.:
Plume spreading test case for coastal ocean models,
<em>Geosci. Model Dev.</em>, 14:6945–6975,
doi:<a class="reference external" href="https://doi.org/10.5194/gmd-14-6945-2021">10.5194/gmd-14-6945-2021</a>, 2021.</p>
<p>Bateman, M. D., Kinnaird, T. C., Hill, J., Ashurst, R. A., Mohan, J., Bateman, R. B. I. and Robinson, R.:
Detailing the impact of the Storegga Tsunami at Montrose, Scotland,
<em>Boreas</em>, bor.12532,
doi:<a class="reference external" href="https://doi.org/10.1111/bor.12532">10.1111/bor.12532</a>, 2021.</p>
<p>Mackie, L., Kramer, S. C., Piggott, M. D. and Angeloudis, A.:
Assessing impacts of tidal power lagoons of a consistent design,
<em>Ocean Engineering</em> 240, p. 109879.
doi: <cite>10.1016/j.oceaneng.2021.109879 <https://doi.org/10.1016/j.oceaneng.2021.109879></cite></p>
<p>Pan, W., Kramer, S. C., and Piggott, M. D.:
A sigma-coordinate non-hydrostatic discontinuous finite element coastal ocean model,
<em>Ocean Modelling</em>, 157:101732,
doi:<a class="reference external" href="https://doi.org/10.1016/j.ocemod.2020.101732">10.1016/j.ocemod.2020.101732</a>, 2021.</p>
<p>Rasheed, S., Warder, S. C., Plancherel, Y., and Piggott, M. D.:
Response of tidal flow regime and sediment transport in North Malé Atoll, Maldives, to coastal modification and sea level rise,
<em>Ocean Science</em>, 17:319–334,
doi:<a class="reference external" href="https://doi.org/10.5194/os-17-319-2021">10.5194/os-17-319-2021</a>, 2021.</p>
<p>Mackie, L., Evans, P. S., Harrold, M. J., O`Doherty, T., Piggott, M. D. and Angeloudis, A.:
Modelling an energetic tidal strait: investigating implications of common numerical configuration choices,
<em>Applied Ocean Research</em>, 108:102494,
doi:<a class="reference external" href="https://doi.org/10.1016/j.apor.2020.102494">10.1016/j.apor.2020.102494</a>, 2021.</p>
<p>Clare, M. C. A., Percival, J. R., Angeloudis, A., Cotter, C. J. and Piggott, M. D.:
Hydro-morphodynamics 2D modelling using a discontinuous Galerkin discretisation,
<em>Computers & Geosciences</em>, 146:104658,
doi:<a class="reference external" href="https://doi.org/10.1016/j.cageo.2020.104658">10.1016/j.cageo.2020.104658</a>, 2021.</p>
<p>Warder, S. C., Horsburgh, K. J. and Piggott, M. D.:
Adjoint-based sensitivity analysis for a numerical storm surge model,
<em>Ocean Modelling</em>, 160:101766,
doi:<a class="reference external" href="https://doi.org/10.1016/j.ocemod.2021.101766">10.1016/j.ocemod.2021.101766</a>, 2021.</p>
<p>Goss, Z. L., Coles, D. S., Kramer, S. C. and Piggott, M. D.:
Efficient economic optimisation of large-scale tidal stream arrays,
<em>Applied Energy</em> 295, p. 116975.
doi: <a class="reference external" href="https://doi.org/10.1016/j.apenergy.2021.116975">10.1016/j.apenergy.2021.116975</a>, 2021.</p>
</section>
<section id="id7">
<h2>2020<a class="headerlink" href="#id7" title="Link to this heading">¶</a></h2>
<p>Mackie, L., Coles, D., Piggott, M. and Angeloudis, A.:
The Potential for Tidal Range Energy Systems to Provide Continuous Power: A UK Case Study,
<em>J. Mar. Sci. Eng</em>, 8:80,
doi:<a class="reference external" href="https://doi.org/10.3390/jmse8100780">10.3390/jmse8100780</a>, 2020.</p>
<p>Angeloudis, A., Kramer, S. C., Hawkins, N., and Piggott, M. D.:
On the potential of linked-basin tidal power plants: An operational and coastal modelling assessment,
<em>Renewable Energy</em>, 155:876–888,
doi:<a class="reference external" href="https://doi.org/10.1016/j.renene.2020.03.167">10.1016/j.renene.2020.03.167</a>, 2020.</p>
<p>Baker, A. L., Craighead, R. M., Jarvis, E. J., Stenton, H. C., Angeloudis, A., Mackie, L., Avdis, A., Piggott, M. D., and Hill, J.:
Modelling the impact of tidal range energy on species communities,
<em>Ocean & Coastal Management</em>, 193:105221,
doi:<a class="reference external" href="https://doi.org/10.1016/j.ocecoaman.2020.105221">10.1016/j.ocecoaman.2020.105221</a>, 2020.</p>
<p>Goss, Z. L., Coles, D. S., and Piggott, M. D.:
Identifying economically viable tidal sites within the Alderney Race through optimization of levelized cost of energy,
<em>Phil. Trans. R. Soc. A</em>, 2178:20190500,
doi:<a class="reference external" href="https://doi.org/10.1098/rsta.2019.0500">10.1098/rsta.2019.0500</a>, 2020.</p>
<p>Pan, W., Kramer, S. C., Kärnä, T., and Piggott, M. D.:
Comparing non-hydrostatic extensions to a discontinuous finite element coastal ocean model,
<em>Ocean Modelling</em>, 151:101634,
doi:<a class="reference external" href="https://doi.org/10.1016/j.ocemod.2020.101634">10.1016/j.ocemod.2020.101634</a>, 2020.</p>
<p>Kärnä, T.:
Discontinuous Galerkin discretization for two-equation turbulence closure model,
<em>Ocean Modelling</em>, 150:101619,
doi:<a class="reference external" href="https://doi.org/10.1016/j.ocemod.2020.101619">10.1016/j.ocemod.2020.101619</a>, 2020.</p>
<p>Wallwork, J. G., Barral, N., Kramer, S. C., Ham, D. A., and Piggott, M. D.:
Goal-oriented Error Estimation and Mesh Adaptation for Shallow Water Modelling,
<em>SN Applied Sciences</em>, 2:1053–1063,
doi:<a class="reference external" href="https://doi.org/10.1007/s42452-020-2745-9">10.1007/s42452-020-2745-9</a>, 2020.</p>
</section>
<section id="id8">
<h2>2019<a class="headerlink" href="#id8" title="Link to this heading">¶</a></h2>
<p>Vouriot, C. V. M., Angeloudis, A., Kramer, S.C., and Piggott, M. D.:
Fate of large-scale vortices in idealized tidal lagoons,
<em>Environ Fluid Mech</em>, 19:329–348,
doi:<a class="reference external" href="https://doi.org/10.1007/s10652-018-9626-4">10.1007/s10652-018-9626-4</a>, 2019.</p>
<p>Harcourt, F., Angeloudis A., and Piggott M. D.:
Utilising the flexible generation potential of tidal range power plants to optimise economic value,
<em>Applied Energy</em>, 237:873–884,
doi:<a class="reference external" href="https://doi.org/10.1016/j.apenergy.2018.12.091">10.1016/j.apenergy.2018.12.091</a>, 2019.</p>
<p>Pan, W., Kramer, S. C., and Piggott, M. D.:
Multi-layer non-hydrostatic free surface modelling using the discontinuous Galerkin method,
<em>Ocean Modelling</em>, 134:68–83,
doi:<a class="reference external" href="https://doi.org/10.1016/j.ocemod.2019.01.003">10.1016/j.ocemod.2019.01.003</a>, 2019.</p>
</section>
<section id="id9">
<h2>2018<a class="headerlink" href="#id9" title="Link to this heading">¶</a></h2>
<p>Kärnä, T., Kramer, S. C., Mitchell, L., Ham, D. A., Piggott, M. D., and Baptista, A. M.:
Thetis coastal ocean model: discontinuous Galerkin discretization for the three-dimensional hydrostatic equations,
<em>Geosci. Model Dev.</em>, 11:4359–4382,
doi:<a class="reference external" href="https://doi.org/10.5194/gmd-11-4359-2018">10.5194/gmd-11-4359-2018</a>, 2018.</p>
<p>Angeloudis, A., Kramer, S. C., Avdis, A., and Piggott, M. D.:
Optimising tidal range power plant operation,
<em>Applied Energy</em>, 212:680–690,
doi:<a class="reference external" href="https://doi.org/10.1016/j.apenergy.2017.12.052">10.1016/j.apenergy.2017.12.052</a>, 2018.</p>
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