agp_tool/pyproject.toml at master · daedalus/agp_tool · GitHub

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[build-system]
requires = ["setuptools>=61.0,<75.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "agp_tool"
version = "0.1.0.7"
description = "Ambulatory glucose profile analysis tool"
readme = "README.md"
license = { file = "LICENSE" }
requires-python = ">=3.9"
authors = [
    { name = "Darío Clavijo" },
]
classifiers = [
    "License :: OSI Approved :: MIT License",
    "Development Status :: 4 - Beta",
    "Intended Audience :: Healthcare Industry",
    "Intended Audience :: Science/Research",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Topic :: Scientific/Engineering :: Medical Science Apps.",
]
dependencies = [
    "pandas>=1.3.0",
    "numpy>=1.21.0",
    "matplotlib>=3.4.0",
    "openpyxl>=3.0.0",
    "xlrd>=2.0.1",
    "odfpy>=1.4.1",
    "Pillow>=11.3.0",
    "fpdf2>=2.7.0",
]

[project.urls]
Homepage = "https://github.com/daedalus/agp_tool"
Repository = "https://github.com/daedalus/agp_tool"
Issues = "https://github.com/daedalus/agp_tool/issues"

[project.scripts]
agp_tool = "agp.main:main"
agp = "agp.main:main"

[project.optional-dependencies]
dev = [
    "ruff",
    "mypy",
    "hatch",
]
test = [
    "pytest",
    "pytest-cov",
    "pytest-mock",
    "pytest-asyncio",
    "hypothesis",
]
lint = [
    "ruff",
    "mypy",
]
all = ["agp_tool[dev,test,lint]"]
cli = ["click>=8.0"]

[tool.setuptools.packages.find]
where = ["."]
include = ["agp*"]

[tool.ruff]
line-length = 88
target-version = "py39"

[tool.ruff.lint]
select = ["E", "F", "W", "I", "UP", "ANN", "TCH", "N", "C4", "ARG"]
ignore = ["E501"]

[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401"]

[tool.ruff.lint.pydocstyle]
convention = "google"

[tool.mypy]
python_version = "3.11"
warn_return_any = true
warn_unused_ignores = true
ignore_missing_imports = true

[tool.pytest.ini_options]
testpaths = ["tests"]
addopts = "-v --tb=short --cov=agp --cov-fail-under=80"
filterwarnings = ["ignore::DeprecationWarning"]

[tool.coverage.run]
source = ["agp"]
branch = true

[tool.coverage.report]
exclude = ["tests/*", "*/__init__.py"]
exclude_lines = [
    "pragma: no cover",
    "def __repr__",
    "raise AssertionError",
    "raise NotImplementedError",
    "if __name__ == .__main__.:",
    "if TYPE_CHECKING:",
]