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package otters
import (
"encoding/csv"
"fmt"
"io"
"os"
"strconv"
"strings"
"time"
)
// ReadCSV reads a CSV file and returns a DataFrame with automatic type inference
func ReadCSV(filename string) (*DataFrame, error) {
return ReadCSVWithOptions(filename, CSVOptions{
HasHeader: true,
Delimiter: ',',
SkipRows: 0,
MaxRows: 0, // unlimited
})
}
// ReadCSVWithOptions reads a CSV file with custom options
func ReadCSVWithOptions(filename string, options CSVOptions) (*DataFrame, error) {
file, err := os.Open(filename)
if err != nil {
return nil, wrapError("ReadCSV", err)
}
defer file.Close()
reader := csv.NewReader(file)
reader.Comma = options.Delimiter
reader.TrimLeadingSpace = true
if err := skipRows(reader, options.SkipRows, "ReadCSV"); err != nil {
return nil, err
}
headers, rows, err := readCSVData(reader, options, "ReadCSV")
if err != nil {
return nil, err
}
return buildDataFrameFromRows(headers, rows)
}
func skipRows(reader *csv.Reader, skipCount int, operation string) error {
for i := 0; i < skipCount; i++ {
if _, err := reader.Read(); err != nil {
if err == io.EOF {
return nil
}
return wrapError(operation, err)
}
}
return nil
}
func readCSVData(reader *csv.Reader, options CSVOptions, operation string) ([]string, [][]string, error) {
if options.HasHeader {
return readCSVWithHeaders(reader, options, operation)
}
return readCSVWithoutHeaders(reader, options, operation)
}
func readCSVWithHeaders(reader *csv.Reader, options CSVOptions, operation string) ([]string, [][]string, error) {
headers, err := reader.Read()
if err != nil {
if err == io.EOF {
return nil, nil, nil
}
return nil, nil, wrapError(operation, err)
}
for i, header := range headers {
headers[i] = cleanHeader(header)
}
rows, err := readDataRows(reader, headers, options, operation)
return headers, rows, err
}
func readCSVWithoutHeaders(reader *csv.Reader, options CSVOptions, operation string) ([]string, [][]string, error) {
firstRow, err := reader.Read()
if err != nil {
if err == io.EOF {
return nil, nil, nil
}
return nil, nil, wrapError(operation, err)
}
headers := generateHeaders(len(firstRow))
allRows := [][]string{firstRow}
for {
row, err := reader.Read()
if err == io.EOF {
break
}
if err != nil {
return nil, nil, wrapError(operation, err)
}
allRows = append(allRows, row)
if options.MaxRows > 0 && len(allRows) >= options.MaxRows {
break
}
}
return headers, allRows, nil
}
func generateHeaders(count int) []string {
headers := make([]string, count)
for i := 0; i < count; i++ {
headers[i] = fmt.Sprintf("Column_%d", i)
}
return headers
}
func readDataRows(reader *csv.Reader, headers []string, options CSVOptions, operation string) ([][]string, error) {
var rows [][]string
rowCount := 0
for {
row, err := reader.Read()
if err == io.EOF {
break
}
if err != nil {
return nil, wrapError(operation, err)
}
if len(row) != len(headers) {
return nil, newOpError(operation,
fmt.Sprintf("row %d has %d columns, expected %d", rowCount+1, len(row), len(headers)))
}
rows = append(rows, row)
rowCount++
if options.MaxRows > 0 && rowCount >= options.MaxRows {
break
}
}
return rows, nil
}
// WriteCSV writes a DataFrame to a CSV file
func (df *DataFrame) WriteCSV(filename string) error {
return df.WriteCSVWithOptions(filename, CSVOptions{
HasHeader: true,
Delimiter: ',',
})
}
// WriteCSVWithOptions writes a DataFrame to CSV with custom options
func (df *DataFrame) WriteCSVWithOptions(filename string, options CSVOptions) error {
if df.err != nil {
return df.err
}
// Create the file
file, err := os.Create(filename)
if err != nil {
return wrapError("WriteCSV", err)
}
defer file.Close()
// Create CSV writer
writer := csv.NewWriter(file)
writer.Comma = options.Delimiter
defer writer.Flush()
// Write headers if requested
if options.HasHeader {
if err := writer.Write(df.order); err != nil {
return wrapError("WriteCSV", err)
}
}
// Write data rows
for i := 0; i < df.length; i++ {
var row []string
for _, colName := range df.order {
value, err := df.columns[colName].Get(i)
if err != nil {
return wrapColumnError("WriteCSV", colName, err)
}
row = append(row, formatValueForCSV(value))
}
if err := writer.Write(row); err != nil {
return wrapError("WriteCSV", err)
}
}
return nil
}
// ReadCSVFromString reads CSV data from a string
func ReadCSVFromString(data string) (*DataFrame, error) {
return ReadCSVFromStringWithOptions(data, CSVOptions{
HasHeader: true,
Delimiter: ',',
SkipRows: 0,
MaxRows: 0,
})
}
// ReadCSVFromStringWithOptions reads CSV data from a string with options
func ReadCSVFromStringWithOptions(data string, options CSVOptions) (*DataFrame, error) {
reader := csv.NewReader(strings.NewReader(data))
reader.Comma = options.Delimiter
reader.TrimLeadingSpace = true
if err := skipRows(reader, options.SkipRows, "ReadCSVFromString"); err != nil {
return nil, err
}
headers, rows, err := readCSVData(reader, options, "ReadCSVFromString")
if err != nil {
return nil, err
}
return buildDataFrameFromRows(headers, rows)
}
// Helper functions
// buildDataFrameFromRows constructs a DataFrame from headers and string data rows
func buildDataFrameFromRows(headers []string, rows [][]string) (*DataFrame, error) {
if len(headers) == 0 {
return NewDataFrame(), nil
}
if len(rows) == 0 {
// Create empty DataFrame with columns
df := NewDataFrame()
for _, header := range headers {
series, err := NewSeries(header, []string{})
if err != nil {
return nil, wrapColumnError("buildDataFrame", header, err)
}
if err := df.addSeriesUnsafe(series); err != nil {
return nil, err
}
}
return df, nil
}
// Transpose data: from rows to columns
columnData := make([][]string, len(headers))
for i := range columnData {
columnData[i] = make([]string, len(rows))
}
for rowIdx, row := range rows {
for colIdx, value := range row {
columnData[colIdx][rowIdx] = value
}
}
// Infer types and convert data
var series []*Series
for i, header := range headers {
colValues := columnData[i]
// Infer the best type for this column
columnType := InferType(colValues)
// Convert string data to inferred type
convertedData, err := convertStringSliceToType(colValues, columnType)
if err != nil {
return nil, wrapColumnError("buildDataFrame", header, err)
}
// Create series
s, err := NewSeries(header, convertedData)
if err != nil {
return nil, wrapColumnError("buildDataFrame", header, err)
}
series = append(series, s)
}
return NewDataFrameFromSeries(series...)
}
// convertStringSliceToType converts a slice of strings to the specified type
func convertStringSliceToType(values []string, targetType ColumnType) (interface{}, error) {
switch targetType {
case StringType:
// Return a copy to avoid external modification
result := make([]string, len(values))
copy(result, values)
return result, nil
case Int64Type:
result := make([]int64, len(values))
for i, value := range values {
converted, err := ConvertValue(value, Int64Type)
if err != nil {
return nil, err
}
result[i] = converted.(int64)
}
return result, nil
case Float64Type:
result := make([]float64, len(values))
for i, value := range values {
converted, err := ConvertValue(value, Float64Type)
if err != nil {
return nil, err
}
result[i] = converted.(float64)
}
return result, nil
case BoolType:
result := make([]bool, len(values))
for i, value := range values {
converted, err := ConvertValue(value, BoolType)
if err != nil {
return nil, err
}
result[i] = converted.(bool)
}
return result, nil
case TimeType:
result := make([]time.Time, len(values))
for i, value := range values {
converted, err := ConvertValue(value, TimeType)
if err != nil {
return nil, err
}
result[i] = converted.(time.Time)
}
return result, nil
default:
return nil, newOpError("convertStringSliceToType",
fmt.Sprintf("unsupported target type: %v", targetType))
}
}
// cleanHeader removes BOM and trims whitespace from column headers
func cleanHeader(header string) string {
// Remove UTF-8 BOM if present
if len(header) >= 3 {
if header[0] == 0xEF && header[1] == 0xBB && header[2] == 0xBF {
header = header[3:]
}
}
// Trim whitespace and normalize
header = strings.TrimSpace(header)
// Replace problematic characters with underscores
header = strings.ReplaceAll(header, " ", "_")
header = strings.ReplaceAll(header, "-", "_")
return header
}
// formatValueForCSV formats a value for CSV output
func formatValueForCSV(value interface{}) string {
switch v := value.(type) {
case string:
return v
case int64:
return strconv.FormatInt(v, 10)
case float64:
return strconv.FormatFloat(v, 'f', -1, 64)
case bool:
return strconv.FormatBool(v)
case time.Time:
if v.IsZero() {
return ""
}
return v.Format("2006-01-02 15:04:05")
default:
return fmt.Sprintf("%v", value)
}
}
// CSV utility functions for advanced use cases
// DetectDelimiter attempts to detect the delimiter used in a CSV file
func DetectDelimiter(filename string) (rune, error) {
file, err := os.Open(filename)
if err != nil {
return ',', wrapError("DetectDelimiter", err)
}
defer file.Close()
// Read a sample of the file
buffer := make([]byte, 1024)
n, err := file.Read(buffer)
if err != nil && err != io.EOF {
return ',', wrapError("DetectDelimiter", err)
}
sample := string(buffer[:n])
// Count common delimiters
delimiters := []rune{',', '\t', ';', '|'}
counts := make(map[rune]int)
for _, delimiter := range delimiters {
counts[delimiter] = strings.Count(sample, string(delimiter))
}
// Return the most frequent delimiter
maxCount := 0
bestDelimiter := ','
for delimiter, count := range counts {
if count > maxCount {
maxCount = count
bestDelimiter = delimiter
}
}
return bestDelimiter, nil
}
// ValidateCSV checks if a CSV file is valid and returns basic info
func ValidateCSV(filename string) (*CSVInfo, error) {
delimiter, err := DetectDelimiter(filename)
if err != nil {
return nil, err
}
file, err := os.Open(filename)
if err != nil {
return nil, wrapError("ValidateCSV", err)
}
defer file.Close()
reader := csv.NewReader(file)
reader.Comma = delimiter
info := &CSVInfo{
Filename: filename,
Delimiter: delimiter,
Rows: 0,
Columns: 0,
HasHeader: true, // We'll detect this
}
// Read first row (potential header)
firstRow, err := reader.Read()
if err != nil {
if err == io.EOF {
return info, nil // Empty file
}
return nil, wrapError("ValidateCSV", err)
}
info.Columns = len(firstRow)
info.Rows = 1
// Read remaining rows and validate consistency
for {
row, err := reader.Read()
if err == io.EOF {
break
}
if err != nil {
return nil, wrapError("ValidateCSV", err)
}
if len(row) != info.Columns {
return nil, newOpError("ValidateCSV",
fmt.Sprintf("inconsistent column count at row %d: expected %d, got %d",
info.Rows+1, info.Columns, len(row)))
}
info.Rows++
}
return info, nil
}
// CSVInfo contains information about a CSV file
type CSVInfo struct {
Filename string
Delimiter rune
Rows int
Columns int
HasHeader bool
}