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import numpy as np
import sklearn.preprocessing as prep
import tensorflow as tf
from tensorflow.examples.tutorials.mnist import input_data
#from tensorflow.contrib.factorization.examples.mnist import fill_feed_dict
def xavier_init(fan_in,fan_out,const=1):
low = -const * np.sqrt(6.0 / (fan_in + fan_out))
high = const * np.sqrt(6.0 / (fan_in + fan_out))
return tf.random_uniform((fan_in, fan_out),
minval=low,maxval=high,
dtype=tf.float32)
class AdditiveGaussianNoiseAutoencoder(object):
def __init__(self, n_input, n_hidden,transfer_function=tf.nn.softplus,
optimizer=tf.train.AdamOptimizer(),scale=0.1):
self.n_input = n_input
self.n_hidden = n_hidden
self.transfer = transfer_function
self.scale = tf.placeholder(tf.float32)
self.training_scale = scale
network_weights = self._initialize_weights()
self.weights = network_weights
self.x = tf.placeholder(tf.float32, [None, self.n_input])
self.n_hidden = self.transfer(tf.add(tf.matmul(
self.x + scale * tf.random_normal((n_input,)),
self.weights['w1']),self.weights['b1']))
self.reconstruction = tf.add(tf.matmul(self.n_hidden,
self.weights['w2']),self.weights['b2'])
self.cost = 0.5 * tf.reduce_sum(tf.pow(tf.subtract(
self.reconstruction,self.x),2.0))
self.optimizer = optimizer.minimize(self.cost)
init = tf.global_variables_initializer()
self.sess = tf.Session()
self.sess.run(init)
def _initialize_weights(self):
all_weights = dict()
all_weights['w1'] = tf.Variable(xavier_init(self.n_input,
self.n_hidden))
all_weights['b1'] = tf.Variable(tf.zeros(self.n_hidden,
dtype=tf.float32))
all_weights['w2'] = tf.Variable(tf.zeros([self.n_hidden,
self.n_input],dtype=tf.float32))
all_weights['b2'] = tf.Variable(tf.zeros([self.n_input],
dtype=tf.float32))
return all_weights
def partial_fit(self,X):
cost,opt = self.sess.run((self.cost,self.optimizer),
feed_dict = {self.x:X,self.scale:self.training_scale})
return cost
def calc_total_cost(self,X):
return self.sess.run(self.cost,feed_dict={self.x:X,
self.scale:self.training_scale
})
def transform(self,X):
return self.sess.run(self.hidden,feed_dict={self.x:X,
self.scale:self.training_scale
})
def generate(self,hidden=None):
if hidden is None:
hidden = np.random.normal(size=self.weight['b1'])
return self.sess.run(self.reconstruction,
feed_dict={self.hidden:hidden})
def reconstruct(self,X):
return self.sess.run(self.reconstruction,feed_dict={self.x:X,
self.scale:self.training_scale
})
def getWeights(self):
return self.sess.run(self.weights['w1'])
def getBiases(self):
return self.sess.run(self.weights['b1'])
mnist = input_data.read_data_sets("MNIST_data/",one_hot=True)
def standard_scale(X_train,X_test):
preprocess = prep.StandardScaler().fit(X_train)
X_train = preprocess.transform(X_train)
X_test = preprocess.transform(X_test)
return X_train,X_test
def get_random_block_from_data(data,batch_size):
start_index = np.random.randint(0,len(data)-batch_size)
return data[start_index:(start_index+batch_size)]
X_train,X_test = standard_scale(mnist.train.images, mnist.test.images)
n_samples = int(mnist.train.num_examples)
training_epochs = 20
batch_size = 128
display_step = 1
autoencoder = AdditiveGaussianNoiseAutoencoder(n_input=784,
n_hidden=200,
transfer_function=tf.nn.softplus,
optimizer=tf.train.AdamOptimizer(learning_rate=0.001),
scale=0.01)
for epoch in range(training_epochs):
avg_cost = 0.
total_batch=int(n_samples / batch_size)
for i in range(total_batch):
batch_xs = get_random_block_from_data(X_train, batch_size)
cost = autoencoder.partial_fit(batch_xs)
avg_cost += cost / n_samples*batch_size
if epoch % display_step == 0:
print("Epoch:",'%04d' %(epoch+1),"cost = ",
"{:.9f}".format(avg_cost))
print("Total cost:"+str(autoencoder.calc_total_cost(X_test)))