From b9dca7a02b2983295a301778ef562ddabe599f91 Mon Sep 17 00:00:00 2001 From: emilcode Date: Sun, 26 Oct 2025 07:28:13 +0000 Subject: [PATCH 1/4] [changed] MLflow tracking uri set to .env settings, now databricks server. --- notebooks/train_nightingale.ipynb | 80 ++++++++++++++++--------------- 1 file changed, 41 insertions(+), 39 deletions(-) diff --git a/notebooks/train_nightingale.ipynb b/notebooks/train_nightingale.ipynb index a3d0f87..4948fc0 100644 --- a/notebooks/train_nightingale.ipynb +++ b/notebooks/train_nightingale.ipynb @@ -285,64 +285,66 @@ "metadata": {}, "outputs": [], "source": [ + "# import mlflow\n", + "# from mlflow import MlflowClient\n", + "\n", + "# TRACKING_URI_LOCAL = \"http://host.docker.internal:5757\"\n", + "\n", + "# client = MlflowClient(tracking_uri=TRACKING_URI_LOCAL)\n", + "\n", "import mlflow\n", - "from mlflow import MlflowClient\n", + "# from mlflow import MlflowClient\n", "\n", - "TRACKING_URI_LOCAL = \"http://host.docker.internal:5757\"\n", + "# At the beginning of your Python script\n", + "from dotenv import load_dotenv\n", "\n", - "client = MlflowClient(tracking_uri=TRACKING_URI_LOCAL)" + "# Load environment variables from .env file\n", + "load_dotenv()" ] }, { - "cell_type": "markdown", - "id": "348bf482", + "cell_type": "code", + "execution_count": null, + "id": "ea50b3d5", "metadata": {}, + "outputs": [], "source": [ - "### Create experiment \n", - "RUN THE FOLLOWING CODE BLOCK ONLY ONCE FOR INITIAL EXPERIMENT SETUP!!" + "import os\n", + "print(\"Env:\", os.getenv(\"MLFLOW_TRACKING_URI\"))\n", + "print(\"From MLflow:\", mlflow.get_tracking_uri())" ] }, { - "cell_type": "code", - "execution_count": null, - "id": "1dcec8ff", + "cell_type": "markdown", + "id": "348bf482", "metadata": {}, - "outputs": [], "source": [ - "experiment_description = (\n", - " \"Nightingale is a bird call classification project.\"\n", - ")\n", - "\n", - "experiment_tags = {\n", - " \"project_name\": \"nightingale\",\n", - " \"mlflow.note.content\": experiment_description,\n", - "}\n", - "\n", - "# only run following command once to create the experiment after the server has been started for the first time\n", - "client.create_experiment(name=\"Nightingale Bird Call Classification\", tags=experiment_tags)" + "### Create experiment \n", + "RUN THE FOLLOWING CODE BLOCK ONLY ONCE FOR INITIAL EXPERIMENT SETUP!!" ] }, { "cell_type": "code", "execution_count": null, - "id": "a5010b9c", + "id": "1dcec8ff", "metadata": {}, "outputs": [], "source": [ - "\n", - "\n", - "# Use the fluent API to set the tracking uri and the active experiment\n", - "mlflow.set_tracking_uri(TRACKING_URI_LOCAL)\n", - "\n", - "# Sets the current active experiment to the \"Nightingale_Bird_Call_Classification\" experiment and returns the Experiment metadata\n", - "nightingale_experiment = mlflow.set_experiment(\"Nightingale Bird Call Classification\")\n", - "\n", - "# Define a run name for this iteration of training.\n", - "# If this is not set, a unique name will be auto-generated for your run.\n", - "# run_name = \"nightingale_classifier_test\"\n", - "\n", - "# Define an artifact path that the model will be saved to.\n", - "# artifact_path = \"classifier_nightingale\"" + "# experiment_description = (\n", + "# \"Nightingale is a bird call classification project.\"\n", + "# )\n", + "\n", + "# experiment_tags = {\n", + "# \"project_name\": \"nightingale\",\n", + "# \"mlflow.note.content\": experiment_description,\n", + "# }\n", + "\n", + "# # only run following command once to create the experiment after the server has been started for the first time\n", + "# # client.create_experiment(name=\"Nightingale Bird Call Classification\", tags=experiment_tags)\n", + "# mlflow.set_experiment(\n", + "# experiment_name=\"/Workspace/Users/ephraim.eckl@posteo.de/nightingale\",\n", + "# experiment_id=\"2165278269360514\"\n", + "# )" ] }, { @@ -427,7 +429,7 @@ "\n", " print(\"Shape of input_example:\", sample_input.shape)\n", " # Log an instance of the trained model for later use\n", - " model_info = mlflow.keras.log_model(model=bird_class_model, name = \"Bird-Call-Classifier-Head\", signature=signature, pip_requirements=['keras==3.10.0'], registered_model_name=\"Reg-Bird-Call-Classifier-Head\")\n", + " model_info = mlflow.keras.log_model(model=bird_class_model, name = \"Bird-Call-Classifier-Head\", signature=signature, pip_requirements=['keras==3.10.0'], registered_model_name=\"nightingale-dev.default.Reg-Bird-Call-Classifier-Head\")\n", "# # mlflow.sklearn.log_model(sk_model=rf, input_example=X_val, name=artifact_path)\n", " " ] @@ -462,7 +464,7 @@ "metadata": {}, "outputs": [], "source": [ - "bird_class_model.save('bird_classifier_head.keras')" + "# bird_class_model.save('bird_classifier_head.keras')" ] } ], From 930d95329119604bd3582edcbc73e4eda970a8af Mon Sep 17 00:00:00 2001 From: emilcode Date: Sun, 26 Oct 2025 07:39:08 +0000 Subject: [PATCH 2/4] [added] mlflow for databricks and dotenv packages added --- poetry.lock | 2160 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[dependency-groups] From 75ccdafadb3f4c4697c531fca627f38e637c8479 Mon Sep 17 00:00:00 2001 From: emilcode Date: Sun, 26 Oct 2025 07:58:12 +0000 Subject: [PATCH 3/4] [added] README instructions how to configure MLFOW_TRACKING_URI for databricks. --- README.md | 33 +++++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) diff --git a/README.md b/README.md index 0f4b08f..244ae27 100644 --- a/README.md +++ b/README.md @@ -46,6 +46,39 @@ https://www.kaggle.com/models/emilcode/nightingale After downloading the folders unzip them. +### How to set up a remote tracking server on your local host system +https://mlflow.org/docs/3.1.3/ml/tracking/tutorials/remote-server/ + +https://mlflow.org/docs/3.1.3/ml/tracking/server/ + +TODO!!!! + +### Default tracking server +If you don't configure/set the MLFLOW_TRACKING_URI to a specific location, MLflow will create a mlruns directory in the CWD or your python run (e.g. next to the notebook if mlfow run has been started for the notebook). + +Optional: To change the MLFLOW_TRACKING_URI during container startup add something like + "containerEnv": { + "MLFLOW_TRACKING_URI": "./mlruns" + }, +to the .devcontainer.json file. + +### Setup mlflow to databricks +If you have a databricks account and you prefere to track your experiments and register your models to the databricks tracking server and unity catalog your can set up the connection doing the following. + +https://docs.databricks.com/aws/en/mlflow3/genai/getting-started/tracing/tracing-ide?language=Use+a+.env+file + +Create an .env file in your project root and add: +''' +DATABRICKS_TOKEN= +DATABRICKS_HOST= (something like: https://abc-a1234b12-a123.cloud.databricks.com) +MLFLOW_TRACKING_URI=databricks +MLFLOW_REGISTRY_URI=databricks-uc (for unity catalog) +MLFLOW_EXPERIMENT_ID= +''' + +The .env file will be ignored by git by default, but make sure to NOT commit and push your .env file as it contains credentials not meant to be public. + + ### Run mlflow tracking server Open the bash/Git bash and change the directory to the unzipped folder containing the model. ```bash From 2cdcfdf15e40083394dfa112cb4b2db328fb15f6 Mon Sep 17 00:00:00 2001 From: emilcode Date: Sun, 26 Oct 2025 08:10:35 +0000 Subject: [PATCH 4/4] [added] README updated --- README.md | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/README.md b/README.md index 244ae27..5190ecb 100644 --- a/README.md +++ b/README.md @@ -56,6 +56,11 @@ TODO!!!! ### Default tracking server If you don't configure/set the MLFLOW_TRACKING_URI to a specific location, MLflow will create a mlruns directory in the CWD or your python run (e.g. next to the notebook if mlfow run has been started for the notebook). +### Use .env file to configure mlflow tracking server +MLFLOW_TRACKING_URI= (local file system or url to remote tracking server) +MLFLOW_EXPERIMENT_ID= + +### Set tracking server during container startup Optional: To change the MLFLOW_TRACKING_URI during container startup add something like "containerEnv": { "MLFLOW_TRACKING_URI": "./mlruns"