diff --git a/renv/profiles/lesson-requirements/renv.lock b/renv/profiles/lesson-requirements/renv.lock index f5c41913..99e8ed76 100644 --- a/renv/profiles/lesson-requirements/renv.lock +++ b/renv/profiles/lesson-requirements/renv.lock @@ -1,6 +1,6 @@ { "R": { - "Version": "4.3.3", + "Version": "4.5.2", "Repositories": [ { "Name": "CRAN", @@ -11,10 +11,10 @@ "Packages": { "DBI": { "Package": "DBI", - "Version": "1.2.3", + "Version": "1.3.0", "Source": "Repository", "Title": "R Database Interface", - "Date": "2024-06-02", + "Date": "2026-02-11", "Authors@R": "c( person(\"R Special Interest Group on Databases (R-SIG-DB)\", role = \"aut\"), person(\"Hadley\", \"Wickham\", role = \"aut\"), person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"R Consortium\", role = \"fnd\") )", "Description": "A database interface definition for communication between R and relational database management systems. All classes in this package are virtual and need to be extended by the various R/DBMS implementations.", "License": "LGPL (>= 2.1)", @@ -27,8 +27,9 @@ "Suggests": [ "arrow", "blob", + "callr", "covr", - "DBItest", + "DBItest (>= 1.8.2)", "dbplyr", "downlit", "dplyr", @@ -37,6 +38,8 @@ "knitr", "magrittr", "nanoarrow (>= 0.3.0.1)", + "otel", + "otelsdk", "RMariaDB", "rmarkdown", "rprojroot", @@ -49,24 +52,24 @@ "Config/autostyle/scope": "line_breaks", "Config/autostyle/strict": "false", "Config/Needs/check": "r-dbi/DBItest", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.1", "Config/Needs/website": "r-dbi/DBItest, r-dbi/dbitemplate, adbi, AzureKusto, bigrquery, DatabaseConnector, dittodb, duckdb, implyr, lazysf, odbc, pool, RAthena, IMSMWU/RClickhouse, RH2, RJDBC, RMariaDB, RMySQL, RPostgres, RPostgreSQL, RPresto, RSQLite, sergeant, sparklyr, withr", "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3.9000", "NeedsCompilation": "no", - "Author": "R Special Interest Group on Databases (R-SIG-DB) [aut], Hadley Wickham [aut], Kirill Müller [aut, cre] (), R Consortium [fnd]", + "Author": "R Special Interest Group on Databases (R-SIG-DB) [aut], Hadley Wickham [aut], Kirill Müller [aut, cre] (ORCID: ), R Consortium [fnd]", "Maintainer": "Kirill Müller ", - "Repository": "RSPM" + "Repository": "CRAN" }, "MASS": { "Package": "MASS", - "Version": "7.3-60.0.1", + "Version": "7.3-65", "Source": "Repository", "Priority": "recommended", - "Date": "2024-01-12", - "Revision": "$Rev: 3621 $", + "Date": "2025-02-19", + "Revision": "$Rev: 3681 $", "Depends": [ - "R (>= 4.0)", + "R (>= 4.4.0)", "grDevices", "graphics", "stats", @@ -81,7 +84,7 @@ "nnet", "survival" ], - "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"ripley@stats.ox.ac.uk\"), person(\"Bill\", \"Venables\", role = \"ctb\"), person(c(\"Douglas\", \"M.\"), \"Bates\", role = \"ctb\"), person(\"Kurt\", \"Hornik\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"Albrecht\", \"Gebhardt\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"David\", \"Firth\", role = \"ctb\"))", + "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Brian.Ripley@R-project.org\"), person(\"Bill\", \"Venables\", role = c(\"aut\", \"cph\")), person(c(\"Douglas\", \"M.\"), \"Bates\", role = \"ctb\"), person(\"Kurt\", \"Hornik\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"Albrecht\", \"Gebhardt\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"David\", \"Firth\", role = \"ctb\", comment = \"support functions for polr\"))", "Description": "Functions and datasets to support Venables and Ripley, \"Modern Applied Statistics with S\" (4th edition, 2002).", "Title": "Support Functions and Datasets for Venables and Ripley's MASS", "LazyData": "yes", @@ -90,16 +93,16 @@ "URL": "http://www.stats.ox.ac.uk/pub/MASS4/", "Contact": "", "NeedsCompilation": "yes", - "Author": "Brian Ripley [aut, cre, cph], Bill Venables [ctb], Douglas M. Bates [ctb], Kurt Hornik [trl] (partial port ca 1998), Albrecht Gebhardt [trl] (partial port ca 1998), David Firth [ctb]", - "Maintainer": "Brian Ripley ", + "Author": "Brian Ripley [aut, cre, cph], Bill Venables [aut, cph], Douglas M. Bates [ctb], Kurt Hornik [trl] (partial port ca 1998), Albrecht Gebhardt [trl] (partial port ca 1998), David Firth [ctb] (support functions for polr)", + "Maintainer": "Brian Ripley ", "Repository": "CRAN" }, "Matrix": { "Package": "Matrix", - "Version": "1.6-5", + "Version": "1.7-4", "Source": "Repository", "VersionNote": "do also bump src/version.h, inst/include/Matrix/version.h", - "Date": "2024-01-06", + "Date": "2025-08-27", "Priority": "recommended", "Title": "Sparse and Dense Matrix Classes and Methods", "Description": "A rich hierarchy of sparse and dense matrix classes, including general, symmetric, triangular, and diagonal matrices with numeric, logical, or pattern entries. Efficient methods for operating on such matrices, often wrapping the 'BLAS', 'LAPACK', and 'SuiteSparse' libraries.", @@ -107,9 +110,9 @@ "URL": "https://Matrix.R-forge.R-project.org", "BugReports": "https://R-forge.R-project.org/tracker/?atid=294&group_id=61", "Contact": "Matrix-authors@R-project.org", - "Authors@R": "c(person(\"Douglas\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Martin\", \"Maechler\", role = c(\"aut\", \"cre\"), email = \"mmaechler+Matrix@gmail.com\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Mikael\", \"Jagan\", role = \"aut\", comment = c(ORCID = \"0000-0002-3542-2938\")), person(\"Timothy A.\", \"Davis\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7614-6899\", \"SuiteSparse libraries, notably CHOLMOD and AMD\", \"collaborators listed in dir(pattern=\\\"^[A-Z]+[.]txt$\\\", full.names=TRUE, system.file(\\\"doc\\\", \\\"SuiteSparse\\\", package=\\\"Matrix\\\"))\")), person(\"Jens\", \"Oehlschlägel\", role = \"ctb\", comment = \"initial nearPD()\"), person(\"Jason\", \"Riedy\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4345-4200\", \"GNU Octave's condest() and onenormest()\", \"Copyright: Regents of the University of California\")), person(\"R Core Team\", role = \"ctb\", comment = \"base R's matrix implementation\"))", + "Authors@R": "c(person(\"Douglas\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Martin\", \"Maechler\", role = c(\"aut\", \"cre\"), email = \"mmaechler+Matrix@gmail.com\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Mikael\", \"Jagan\", role = \"aut\", comment = c(ORCID = \"0000-0002-3542-2938\")), person(\"Timothy A.\", \"Davis\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7614-6899\", \"SuiteSparse libraries\", \"collaborators listed in dir(system.file(\\\"doc\\\", \\\"SuiteSparse\\\", package=\\\"Matrix\\\"), pattern=\\\"License\\\", full.names=TRUE, recursive=TRUE)\")), person(\"George\", \"Karypis\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2753-1437\", \"METIS library\", \"Copyright: Regents of the University of Minnesota\")), person(\"Jason\", \"Riedy\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4345-4200\", \"GNU Octave's condest() and onenormest()\", \"Copyright: Regents of the University of California\")), person(\"Jens\", \"Oehlschlägel\", role = \"ctb\", comment = \"initial nearPD()\"), person(\"R Core Team\", role = \"ctb\", comment = c(ROR = \"02zz1nj61\", \"base R's matrix implementation\")))", "Depends": [ - "R (>= 3.5.0)", + "R (>= 4.4)", "methods" ], "Imports": [ @@ -135,7 +138,7 @@ "BuildResaveData": "no", "Encoding": "UTF-8", "NeedsCompilation": "yes", - "Author": "Douglas Bates [aut] (), Martin Maechler [aut, cre] (), Mikael Jagan [aut] (), Timothy A. Davis [ctb] (, SuiteSparse libraries, notably CHOLMOD and AMD, collaborators listed in dir(pattern=\"^[A-Z]+[.]txt$\", full.names=TRUE, system.file(\"doc\", \"SuiteSparse\", package=\"Matrix\"))), Jens Oehlschlägel [ctb] (initial nearPD()), Jason Riedy [ctb] (, GNU Octave's condest() and onenormest(), Copyright: Regents of the University of California), R Core Team [ctb] (base R's matrix implementation)", + "Author": "Douglas Bates [aut] (ORCID: ), Martin Maechler [aut, cre] (ORCID: ), Mikael Jagan [aut] (ORCID: ), Timothy A. Davis [ctb] (ORCID: , SuiteSparse libraries, collaborators listed in dir(system.file(\"doc\", \"SuiteSparse\", package=\"Matrix\"), pattern=\"License\", full.names=TRUE, recursive=TRUE)), George Karypis [ctb] (ORCID: , METIS library, Copyright: Regents of the University of Minnesota), Jason Riedy [ctb] (ORCID: , GNU Octave's condest() and onenormest(), Copyright: Regents of the University of California), Jens Oehlschlägel [ctb] (initial nearPD()), R Core Team [ctb] (ROR: , base R's matrix implementation)", "Maintainer": "Martin Maechler ", "Repository": "CRAN" }, @@ -266,7 +269,7 @@ }, "RMySQL": { "Package": "RMySQL", - "Version": "0.11.1", + "Version": "0.11.2", "Source": "Repository", "Title": "Database Interface and 'MySQL' Driver for R", "Description": "Legacy 'DBI' interface to 'MySQL' / 'MariaDB' based on old code ported from S-PLUS. A modern 'MySQL' client written in 'C++' is available from the 'RMariaDB' package.", @@ -289,7 +292,7 @@ "curl" ], "RoxygenNote": "7.3.2.9000", - "Author": "Jeroen Ooms [aut, cre] (), David James [aut], Saikat DebRoy [aut], Hadley Wickham [aut], Jeffrey Horner [aut], RStudio [cph]", + "Author": "Jeroen Ooms [aut, cre] (ORCID: ), David James [aut], Saikat DebRoy [aut], Hadley Wickham [aut], Jeffrey Horner [aut], RStudio [cph]", "Maintainer": "Jeroen Ooms ", "Repository": "CRAN" }, @@ -750,15 +753,15 @@ }, "boot": { "Package": "boot", - "Version": "1.3-30", + "Version": "1.3-32", "Source": "Repository", "Priority": "recommended", - "Date": "2024-02-19", - "Authors@R": "c(person(\"Angelo\", \"Canty\", role = \"aut\", email = \"cantya@mcmaster.ca\", comment = \"author of original code for S\"), person(\"Brian\", \"Ripley\", role = c(\"aut\", \"trl\"), email = \"ripley@stats.ox.ac.uk\", comment = \"conversion to R, maintainer 1999--2022, author of parallel support\"), person(\"Alessandra R.\", \"Brazzale\", role = c(\"ctb\", \"cre\"), email = \"brazzale@stat.unipd.it\", comment = \"minor bug fixes\"))", + "Date": "2025-08-29", + "Authors@R": "c(person(\"Angelo\", \"Canty\", role = \"aut\", email = \"cantya@mcmaster.ca\", comment = \"author of original code for S\"), person(\"Brian\", \"Ripley\", role = c(\"aut\", \"trl\"), email = \"Brian.Ripley@R-project.org\", comment = \"conversion to R, maintainer 1999--2022, author of parallel support\"), person(\"Alessandra R.\", \"Brazzale\", role = c(\"ctb\", \"cre\"), email = \"brazzale@stat.unipd.it\", comment = \"minor bug fixes\"))", "Maintainer": "Alessandra R. Brazzale ", "Note": "Maintainers are not available to give advice on using a package they did not author.", "Description": "Functions and datasets for bootstrapping from the book \"Bootstrap Methods and Their Application\" by A. C. Davison and D. V. Hinkley (1997, CUP), originally written by Angelo Canty for S.", - "Title": "Bootstrap Functions (Originally by Angelo Canty for S)", + "Title": "Bootstrap Functions", "Depends": [ "R (>= 3.0.0)", "graphics", @@ -1139,6 +1142,33 @@ "Maintainer": "Michel Lang ", "Repository": "CRAN" }, + "chron": { + "Package": "chron", + "Version": "2.3-62", + "Source": "Repository", + "Title": "Chronological Objects which Can Handle Dates and Times", + "Description": "Provides chronological objects which can handle dates and times.", + "Authors@R": "c(person(\"David\", \"James\", role = \"aut\", comment = \"S original\"), person(\"Kurt\", \"Hornik\", role = c(\"aut\", \"trl\", \"cre\"), email = \"Kurt.Hornik@R-project.org\", comment = c(ORCID = \"0000-0003-4198-9911\", \"R port\")), person(\"Gabor\", \"Grothendieck\", role = \"ctb\", email = \"ggrothendieck@gmail.com\"), person(\"R Core Team\", role = \"ctb\"))", + "Depends": [ + "R (>= 2.12.0)" + ], + "Imports": [ + "graphics", + "stats" + ], + "Suggests": [ + "scales", + "ggplot2" + ], + "Enhances": [ + "zoo" + ], + "License": "GPL-2", + "NeedsCompilation": "yes", + "Author": "David James [aut] (S original), Kurt Hornik [aut, trl, cre] (, R port), Gabor Grothendieck [ctb], R Core Team [ctb]", + "Maintainer": "Kurt Hornik ", + "Repository": "CRAN" + }, "ciTools": { "Package": "ciTools", "Version": "0.6.1", @@ -1229,7 +1259,7 @@ "LazyData": "true", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", - "Author": "Karim Mané [aut] (), Thibaut Jombart [ctb] (Thibaut contributed in development of date_guess().), Abdoelnaser Degoot [aut] (), Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut, cre] (), Hugo Gruson [ctb, rev] (), Pratik R. Gupte [rev] (), James M. Azam [rev] (), Joshua W. Lambert [rev, ctb] (), Chris Hartgerink [rev] (), Andree Valle-Campos [rev, ctb] (), London School of Hygiene and Tropical Medicine, LSHTM [cph] (00a0jsq62), data.org [fnd]", + "Author": "Karim Mané [aut] (ORCID: ), Thibaut Jombart [ctb] (Thibaut contributed in development of date_guess().), Abdoelnaser Degoot [aut] (ORCID: ), Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut, cre] (ORCID: ), Hugo Gruson [ctb, rev] (ORCID: ), Pratik R. Gupte [rev] (ORCID: ), James M. Azam [rev] (ORCID: ), Joshua W. Lambert [rev, ctb] (ORCID: ), Chris Hartgerink [rev] (ORCID: ), Andree Valle-Campos [rev, ctb] (ORCID: ), London School of Hygiene and Tropical Medicine, LSHTM [cph] (ROR: ), data.org [fnd]", "Maintainer": "Bubacarr Bah ", "RemoteType": "github", "RemoteHost": "api.github.com", @@ -1521,7 +1551,7 @@ }, "dbplyr": { "Package": "dbplyr", - "Version": "2.5.1", + "Version": "2.5.2", "Source": "Repository", "Type": "Package", "Title": "A 'dplyr' Back End for Databases", @@ -1774,7 +1804,7 @@ }, "dtplyr": { "Package": "dtplyr", - "Version": "1.3.2", + "Version": "1.3.3", "Source": "Repository", "Title": "Data Table Back-End for 'dplyr'", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"cre\", \"aut\")), person(\"Maximilian\", \"Girlich\", role = \"aut\"), person(\"Mark\", \"Fairbanks\", role = \"aut\"), person(\"Ryan\", \"Dickerson\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", @@ -1809,7 +1839,7 @@ "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2.9000", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Author": "Hadley Wickham [cre, aut], Maximilian Girlich [aut], Mark Fairbanks [aut], Ryan Dickerson [aut], Posit Software, PBC [cph, fnd]", "Maintainer": "Hadley Wickham ", @@ -2006,7 +2036,7 @@ }, "fastymd": { "Package": "fastymd", - "Version": "0.1.4", + "Version": "0.1.5", "Source": "Repository", "Title": "Fast Utilities for Year Month Day Objects", "Authors@R": "c( person( given = \"Tim\", family = \"Taylor\", role = c(\"aut\", \"cre\"), email = \"tim.taylor@hiddenelephants.co.uk\", comment = c(ORCID = \"0000-0002-8587-7113\") ), person( given = \"Howard\", family = \"Hinnant\", role = \"aut\", comment = \"Author of underlying algorithms for calculating Epoch days to Calendar days and vice versa\" ), person( \"jerichaux\", role = \"aut\", comment = \"Author of included branchless leap year calculation\" ) )", @@ -2113,10 +2143,10 @@ }, "foreign": { "Package": "foreign", - "Version": "0.8-86", + "Version": "0.8-91", "Source": "Repository", "Priority": "recommended", - "Date": "2023-11-26", + "Date": "2026-01-29", "Title": "Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...", "Depends": [ "R (>= 4.0.0)" @@ -2126,7 +2156,7 @@ "utils", "stats" ], - "Authors@R": "c( person(\"R Core Team\", email = \"R-core@R-project.org\", role = c(\"aut\", \"cph\", \"cre\")), person(\"Roger\", \"Bivand\", role = c(\"ctb\", \"cph\")), person(c(\"Vincent\", \"J.\"), \"Carey\", role = c(\"ctb\", \"cph\")), person(\"Saikat\", \"DebRoy\", role = c(\"ctb\", \"cph\")), person(\"Stephen\", \"Eglen\", role = c(\"ctb\", \"cph\")), person(\"Rajarshi\", \"Guha\", role = c(\"ctb\", \"cph\")), person(\"Swetlana\", \"Herbrandt\", role = \"ctb\"), person(\"Nicholas\", \"Lewin-Koh\", role = c(\"ctb\", \"cph\")), person(\"Mark\", \"Myatt\", role = c(\"ctb\", \"cph\")), person(\"Michael\", \"Nelson\", role = \"ctb\"), person(\"Ben\", \"Pfaff\", role = \"ctb\"), person(\"Brian\", \"Quistorff\", role = \"ctb\"), person(\"Frank\", \"Warmerdam\", role = c(\"ctb\", \"cph\")), person(\"Stephen\", \"Weigand\", role = c(\"ctb\", \"cph\")), person(\"Free Software Foundation, Inc.\", role = \"cph\"))", + "Authors@R": "c( person(\"R Core Team\", email = \"R-core@R-project.org\", role = c(\"aut\", \"cph\", \"cre\"), comment = c(ROR = \"02zz1nj61\")), person(\"Roger\", \"Bivand\", role = c(\"ctb\", \"cph\")), person(c(\"Vincent\", \"J.\"), \"Carey\", role = c(\"ctb\", \"cph\")), person(\"Saikat\", \"DebRoy\", role = c(\"ctb\", \"cph\")), person(\"Stephen\", \"Eglen\", role = c(\"ctb\", \"cph\")), person(\"Rajarshi\", \"Guha\", role = c(\"ctb\", \"cph\")), person(\"Swetlana\", \"Herbrandt\", role = \"ctb\"), person(\"Nicholas\", \"Lewin-Koh\", role = c(\"ctb\", \"cph\")), person(\"Mark\", \"Myatt\", role = c(\"ctb\", \"cph\")), person(\"Michael\", \"Nelson\", role = \"ctb\"), person(\"Ben\", \"Pfaff\", role = \"ctb\"), person(\"Brian\", \"Quistorff\", role = \"ctb\"), person(\"Frank\", \"Warmerdam\", role = c(\"ctb\", \"cph\")), person(\"Stephen\", \"Weigand\", role = c(\"ctb\", \"cph\")), person(\"Free Software Foundation, Inc.\", role = \"cph\"))", "Contact": "see 'MailingList'", "Copyright": "see file COPYRIGHTS", "Description": "Reading and writing data stored by some versions of 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', and for reading and writing some 'dBase' files.", @@ -2137,7 +2167,7 @@ "MailingList": "R-help@r-project.org", "URL": "https://svn.r-project.org/R-packages/trunk/foreign/", "NeedsCompilation": "yes", - "Author": "R Core Team [aut, cph, cre], Roger Bivand [ctb, cph], Vincent J. Carey [ctb, cph], Saikat DebRoy [ctb, cph], Stephen Eglen [ctb, cph], Rajarshi Guha [ctb, cph], Swetlana Herbrandt [ctb], Nicholas Lewin-Koh [ctb, cph], Mark Myatt [ctb, cph], Michael Nelson [ctb], Ben Pfaff [ctb], Brian Quistorff [ctb], Frank Warmerdam [ctb, cph], Stephen Weigand [ctb, cph], Free Software Foundation, Inc. [cph]", + "Author": "R Core Team [aut, cph, cre] (ROR: ), Roger Bivand [ctb, cph], Vincent J. Carey [ctb, cph], Saikat DebRoy [ctb, cph], Stephen Eglen [ctb, cph], Rajarshi Guha [ctb, cph], Swetlana Herbrandt [ctb], Nicholas Lewin-Koh [ctb, cph], Mark Myatt [ctb, cph], Michael Nelson [ctb], Ben Pfaff [ctb], Brian Quistorff [ctb], Frank Warmerdam [ctb, cph], Stephen Weigand [ctb, cph], Free Software Foundation, Inc. [cph]", "Maintainer": "R Core Team ", "Repository": "CRAN" }, @@ -2479,7 +2509,7 @@ }, "grates": { "Package": "grates", - "Version": "1.7.1", + "Version": "1.7.2", "Source": "Repository", "Title": "Grouped Date Classes", "Authors@R": "c( person( given = \"Tim\", family = \"Taylor\", role = c(\"aut\", \"cre\"), email = \"tim.taylor@hiddenelephants.co.uk\", comment = c(ORCID = \"0000-0002-8587-7113\") ) )", @@ -2750,19 +2780,19 @@ }, "httr": { "Package": "httr", - "Version": "1.4.7", + "Version": "1.4.8", "Source": "Repository", "Title": "Tools for Working with URLs and HTTP", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\")) )", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", "Description": "Useful tools for working with HTTP organised by HTTP verbs (GET(), POST(), etc). Configuration functions make it easy to control additional request components (authenticate(), add_headers() and so on).", "License": "MIT + file LICENSE", "URL": "https://httr.r-lib.org/, https://github.com/r-lib/httr", "BugReports": "https://github.com/r-lib/httr/issues", "Depends": [ - "R (>= 3.5)" + "R (>= 3.6)" ], "Imports": [ - "curl (>= 5.0.2)", + "curl (>= 5.1.0)", "jsonlite", "mime", "openssl (>= 0.8)", @@ -2782,26 +2812,22 @@ "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate", "Encoding": "UTF-8", - "RoxygenNote": "7.2.3", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Hadley Wickham [aut, cre], Posit, PBC [cph, fnd]", + "Author": "Hadley Wickham [aut, cre], Posit Software, PBC [cph, fnd]", "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, - "i2extras": { - "Package": "i2extras", - "Version": "0.2.1.9000", - "Source": "GitHub", - "Type": "Package", - "Title": "Functions to Work with 'incidence2' Objects", - "Authors@R": "c( person(\"Tim\", \"Taylor\", role = c(\"aut\", \"cre\"), email = \"tim.taylor@hiddenelephants.co.uk\", comment = c(ORCID = \"0000-0002-8587-7113\")), person(\"Thibaut\", \"Jombart\", role = c(\"aut\"), email = \"thibautjombart@gmail.com\") )", - "Description": "Provides functions to work with 'incidence2' objects, including a simplified interface for trend fitting and peak estimation. This package is part of the RECON () toolkit for outbreak analysis (= 4.1)" ], @@ -2841,15 +2867,16 @@ "xml2" ], "VignetteBuilder": "knitr", - "RemoteType": "github", - "RemoteHost": "api.github.com", - "RemoteRepo": "i2extras", - "RemoteUsername": "reconverse", - "RemoteRef": "HEAD", - "RemoteSha": "10fea678e96bde442324df85272b3d641f32933c", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/testthat/start-first": "resp-stream, req-perform", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Tim Taylor [aut, cre] (), Thibaut Jombart [aut]", - "Maintainer": "Tim Taylor " + "Author": "Hadley Wickham [aut, cre], Posit Software, PBC [cph, fnd], Maximilian Girlich [ctb]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" }, "ids": { "Package": "ids", @@ -2880,7 +2907,7 @@ }, "incidence2": { "Package": "incidence2", - "Version": "2.6.3", + "Version": "2.6.4", "Source": "Repository", "Type": "Package", "Title": "Compute, Handle and Plot Incidence of Dated Events", @@ -2908,7 +2935,7 @@ "vctrs", "ympes (>= 1.3.0)" ], - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "Suggests": [ "outbreaks", "ggplot2", @@ -3147,7 +3174,7 @@ "NeedsCompilation": "no", "Author": "Hao Zhu [aut, cre] (), Thomas Travison [ctb], Timothy Tsai [ctb], Will Beasley [ctb], Yihui Xie [ctb], GuangChuang Yu [ctb], Stéphane Laurent [ctb], Rob Shepherd [ctb], Yoni Sidi [ctb], Brian Salzer [ctb], George Gui [ctb], Yeliang Fan [ctb], Duncan Murdoch [ctb], Vincent Arel-Bundock [ctb], Bill Evans [ctb]", "Maintainer": "Hao Zhu ", - "Repository": "https://packagemanager.posit.co/cran/__linux__/noble/latest" + "Repository": "CRAN" }, "knitr": { "Package": "knitr", @@ -3235,7 +3262,7 @@ }, "later": { "Package": "later", - "Version": "1.4.5", + "Version": "1.4.7", "Source": "Repository", "Type": "Package", "Title": "Utilities for Scheduling Functions to Execute Later with Event Loops", @@ -3684,16 +3711,16 @@ }, "nlme": { "Package": "nlme", - "Version": "3.1-164", + "Version": "3.1-168", "Source": "Repository", - "Date": "2023-11-27", + "Date": "2025-03-31", "Priority": "recommended", "Title": "Linear and Nonlinear Mixed Effects Models", - "Authors@R": "c(person(\"José\", \"Pinheiro\", role = \"aut\", comment = \"S version\"), person(\"Douglas\", \"Bates\", role = \"aut\", comment = \"up to 2007\"), person(\"Saikat\", \"DebRoy\", role = \"ctb\", comment = \"up to 2002\"), person(\"Deepayan\", \"Sarkar\", role = \"ctb\", comment = \"up to 2005\"), person(\"EISPACK authors\", role = \"ctb\", comment = \"src/rs.f\"), person(\"Siem\", \"Heisterkamp\", role = \"ctb\", comment = \"Author fixed sigma\"), person(\"Bert\", \"Van Willigen\",role = \"ctb\", comment = \"Programmer fixed sigma\"), person(\"Johannes\", \"Ranke\", role = \"ctb\", comment = \"varConstProp()\"), person(\"R Core Team\", email = \"R-core@R-project.org\", role = c(\"aut\", \"cre\")))", + "Authors@R": "c(person(\"José\", \"Pinheiro\", role = \"aut\", comment = \"S version\"), person(\"Douglas\", \"Bates\", role = \"aut\", comment = \"up to 2007\"), person(\"Saikat\", \"DebRoy\", role = \"ctb\", comment = \"up to 2002\"), person(\"Deepayan\", \"Sarkar\", role = \"ctb\", comment = \"up to 2005\"), person(\"EISPACK authors\", role = \"ctb\", comment = \"src/rs.f\"), person(\"Siem\", \"Heisterkamp\", role = \"ctb\", comment = \"Author fixed sigma\"), person(\"Bert\", \"Van Willigen\",role = \"ctb\", comment = \"Programmer fixed sigma\"), person(\"Johannes\", \"Ranke\", role = \"ctb\", comment = \"varConstProp()\"), person(\"R Core Team\", email = \"R-core@R-project.org\", role = c(\"aut\", \"cre\"), comment = c(ROR = \"02zz1nj61\")))", "Contact": "see 'MailingList'", "Description": "Fit and compare Gaussian linear and nonlinear mixed-effects models.", "Depends": [ - "R (>= 3.5.0)" + "R (>= 3.6.0)" ], "Imports": [ "graphics", @@ -3702,7 +3729,6 @@ "lattice" ], "Suggests": [ - "Hmisc", "MASS", "SASmixed" ], @@ -3713,7 +3739,7 @@ "MailingList": "R-help@r-project.org", "URL": "https://svn.r-project.org/R-packages/trunk/nlme/", "NeedsCompilation": "yes", - "Author": "José Pinheiro [aut] (S version), Douglas Bates [aut] (up to 2007), Saikat DebRoy [ctb] (up to 2002), Deepayan Sarkar [ctb] (up to 2005), EISPACK authors [ctb] (src/rs.f), Siem Heisterkamp [ctb] (Author fixed sigma), Bert Van Willigen [ctb] (Programmer fixed sigma), Johannes Ranke [ctb] (varConstProp()), R Core Team [aut, cre]", + "Author": "José Pinheiro [aut] (S version), Douglas Bates [aut] (up to 2007), Saikat DebRoy [ctb] (up to 2002), Deepayan Sarkar [ctb] (up to 2005), EISPACK authors [ctb] (src/rs.f), Siem Heisterkamp [ctb] (Author fixed sigma), Bert Van Willigen [ctb] (Programmer fixed sigma), Johannes Ranke [ctb] (varConstProp()), R Core Team [aut, cre] (02zz1nj61)", "Maintainer": "R Core Team ", "Repository": "CRAN" }, @@ -3851,7 +3877,7 @@ }, "openssl": { "Package": "openssl", - "Version": "2.3.4", + "Version": "2.3.5", "Source": "Repository", "Type": "Package", "Title": "Toolkit for Encryption, Signatures and Certificates Based on OpenSSL", @@ -4342,17 +4368,11 @@ "Config/testthat/edition": "3", "Config/usethis/last-upkeep": "2025-04-25", "Encoding": "UTF-8", - "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "SystemRequirements": "freetype2, libpng, libtiff, libjpeg, libwebp, libwebpmux", - "Config/pak/sysreqs": "libfontconfig1-dev libfreetype6-dev libfribidi-dev libharfbuzz-dev libjpeg-dev libpng-dev libtiff-dev libwebp-dev", - "Repository": "https://carpentries.r-universe.dev", "NeedsCompilation": "yes", "Author": "Thomas Lin Pedersen [cre, aut] (ORCID: ), Maxim Shemanarev [aut, cph] (Author of AGG), Tony Juricic [ctb, cph] (Contributor to AGG), Milan Marusinec [ctb, cph] (Contributor to AGG), Spencer Garrett [ctb] (Contributor to AGG), Posit Software, PBC [cph, fnd] (ROR: )", - "RemoteType": "repository", - "RemoteUrl": "https://github.com/r-lib/ragg", - "RemoteRef": "v1.5.0", - "RemoteSha": "0ca12a78be048fcb89f2320ae33b3f4fe642925d" + "Repository": "CRAN" }, "randomNames": { "Package": "randomNames", @@ -4489,7 +4509,7 @@ "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "SystemRequirements": "odbc, libmariadbclient-dev", - "Author": "Karim Mané [aut] (), Emmanuel Kabuga [aut] (), Bubacarr Bah [aut, cre] (), Bankolé Ahadzie [ctb], Nuredin Mohammed [ctb], Abdoelnaser Degoot [ctb], Hugo Gruson [rev] (), Pratik Gupte [rev] (), Andree Valle-Campos [rev] (), London School of Hygiene and Tropical Medicine, LSHTM [cph], data.org [fnd]", + "Author": "Karim Mané [aut] (ORCID: ), Emmanuel Kabuga [aut] (ORCID: ), Bubacarr Bah [aut, cre] (ORCID: ), Bankolé Ahadzie [ctb], Nuredin Mohammed [ctb], Abdoelnaser Degoot [ctb], Hugo Gruson [rev] (ORCID: ), Pratik Gupte [rev] (ORCID: ), Andree Valle-Campos [rev] (ORCID: ), London School of Hygiene and Tropical Medicine, LSHTM [cph], data.org [fnd]", "Maintainer": "Bubacarr Bah ", "RemoteType": "github", "RemoteHost": "api.github.com", @@ -4501,29 +4521,31 @@ }, "readr": { "Package": "readr", - "Version": "2.1.6", + "Version": "2.2.0", "Source": "Repository", "Title": "Read Rectangular Text Data", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\") )", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = c(\"ctb\", \"cph\"), comment = \"grisu3 implementation\") )", "Description": "The goal of 'readr' is to provide a fast and friendly way to read rectangular data (like 'csv', 'tsv', and 'fwf'). It is designed to flexibly parse many types of data found in the wild, while still cleanly failing when data unexpectedly changes.", "License": "MIT + file LICENSE", "URL": "https://readr.tidyverse.org, https://github.com/tidyverse/readr", "BugReports": "https://github.com/tidyverse/readr/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1)" ], "Imports": [ - "cli (>= 3.2.0)", + "cli", "clipr", "crayon", + "glue", "hms (>= 0.4.1)", - "lifecycle (>= 0.2.0)", + "lifecycle", "methods", "R6", "rlang", "tibble", "utils", - "vroom (>= 1.6.0)" + "vroom (>= 1.7.0)", + "withr" ], "Suggests": [ "covr", @@ -4536,7 +4558,6 @@ "testthat (>= 3.2.0)", "tzdb (>= 0.1.1)", "waldo", - "withr", "xml2" ], "LinkingTo": [ @@ -4547,11 +4568,12 @@ "Config/Needs/website": "tidyverse, tidyverse/tidytemplate", "Config/testthat/edition": "3", "Config/testthat/parallel": "false", + "Config/usethis/last-upkeep": "2025-11-14", "Encoding": "UTF-8", "Language": "en-US", "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut], Jim Hester [aut], Romain Francois [ctb], Jennifer Bryan [aut, cre] (ORCID: ), Shelby Bearrows [ctb], Posit Software, PBC [cph, fnd], https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [ctb, cph] (grisu3 implementation), Mikkel Jørgensen [ctb, cph] (grisu3 implementation)", + "Author": "Hadley Wickham [aut], Jim Hester [aut], Romain Francois [ctb], Jennifer Bryan [aut, cre] (ORCID: ), Shelby Bearrows [ctb], Posit Software, PBC [cph, fnd] (ROR: ), https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [ctb, cph] (grisu3 implementation), Mikkel Jørgensen [ctb, cph] (grisu3 implementation)", "Maintainer": "Jennifer Bryan ", "Repository": "CRAN" }, @@ -5323,11 +5345,11 @@ }, "survival": { "Package": "survival", - "Version": "3.5-8", + "Version": "3.8-6", "Source": "Repository", "Title": "Survival Analysis", "Priority": "recommended", - "Date": "2024-02-13", + "Date": "2026-01-09", "Depends": [ "R (>= 3.5.0)" ], @@ -5445,7 +5467,7 @@ "RoxygenNote": "7.3.1", "Encoding": "UTF-8", "NeedsCompilation": "yes", - "Repository": "CRAN" + "Repository": "https://packagemanager.posit.co/cran/__linux__/jammy/latest" }, "systemfonts": { "Package": "systemfonts", @@ -5488,18 +5510,12 @@ "Config/Needs/website": "tidyverse/tidytemplate", "Config/usethis/last-upkeep": "2025-04-23", "Encoding": "UTF-8", - "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "SystemRequirements": "fontconfig, freetype2", - "Config/pak/sysreqs": "libfontconfig1-dev libfreetype6-dev", - "Repository": "https://carpentries.r-universe.dev", "NeedsCompilation": "yes", "Author": "Thomas Lin Pedersen [aut, cre] (ORCID: ), Jeroen Ooms [aut] (ORCID: ), Devon Govett [aut] (Author of font-manager), Posit Software, PBC [cph, fnd] (ROR: )", "Maintainer": "Thomas Lin Pedersen ", - "RemoteType": "repository", - "RemoteUrl": "https://github.com/r-lib/systemfonts", - "RemoteRef": "v1.3.1", - "RemoteSha": "cbb69fb67798b2f27bc88bd693fec705524e7281" + "Repository": "CRAN" }, "textshaping": { "Package": "textshaping", @@ -5891,7 +5907,7 @@ "LazyData": "true", "URL": "https://github.com/epiverse-trace/tracetheme", "BugReports": "https://github.com/epiverse-trace/tracetheme/issues", - "Author": "Hugo Gruson [aut, cre] (), The Epiverse-TRACE team [aut, cph]", + "Author": "Hugo Gruson [aut, cre] (ORCID: ), The Epiverse-TRACE team [aut, cph]", "Maintainer": "Hugo Gruson ", "RemoteType": "github", "RemoteHost": "api.github.com", @@ -6129,6 +6145,36 @@ "Maintainer": "Jennifer Bryan ", "Repository": "CRAN" }, + "wakefield": { + "Package": "wakefield", + "Version": "0.3.6", + "Source": "Repository", + "Title": "Generate Random Data Sets", + "Authors@R": "c( person(\"Tyler\", \"Rinker\", email = \"tyler.rinker@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Josh\", \"O'Brien\", role = \"ctb\"), person(\"Ananda\", \"Mahto\", role = \"ctb\"), person(\"Matthew\", \"Sigal\", role = \"ctb\"), person(\"Jonathan\", \"Carroll\", role = \"ctb\"), person(\"Scott\", \"Westenberger\", role = \"ctb\") )", + "Maintainer": "Tyler Rinker ", + "Description": "Generates random data sets including: data.frames, lists, and vectors.", + "Depends": [ + "R (>= 3.2.0)" + ], + "Imports": [ + "chron", + "ggplot2", + "dplyr", + "stringi" + ], + "Suggests": [ + "testthat" + ], + "License": "GPL-2", + "LazyData": "TRUE", + "URL": "https://github.com/trinker/wakefield", + "BugReports": "https://github.com/trinker/wakefield/issues", + "Collate": "'utils.R' 'r_sample.R' 'age.R' 'r_sample_factor.R' 'animal.R' 'r_sample_binary.R' 'answer.R' 'area.R' 'as_integer.R' 'car.R' 'children.R' 'coin.R' 'color.R' 'date_stamp.R' 'r_sample_logical.R' 'death.R' 'dice.R' 'dna.R' 'dob.R' 'dummy.R' 'education.R' 'employment.R' 'eye.R' 'grade.R' 'grade_level.R' 'group.R' 'hair.R' 'normal.R' 'height.R' 'hour.R' 'id.R' 'income.R' 'internet_browser.R' 'interval.R' 'iq.R' 'language.R' 'level.R' 'r_sample_ordered.R' 'likert.R' 'lorem_ipsum.R' 'marital.R' 'military.R' 'minute.R' 'month.R' 'r_sample_replace.R' 'wakefield-package.R' 'name.R' 'peek.R' 'political.R' 'probs.R' 'r_data.R' 'r_data_frame.R' 'r_dummy.R' 'seriesname.R' 'r_insert.R' 'r_list.R' 'r_na.R' 'r_sample_integer.R' 'r_series.R' 'race.R' 'relate.R' 'religion.R' 'sat.R' 'second.R' 'sentence.R' 'sex.R' 'sex_inclusive.R' 'smokes.R' 'speed.R' 'state.R' 'string.R' 'table_heat.R' 'time_stamp.R' 'upper.R' 'valid.R' 'variables.R' 'varname.R' 'year.R' 'zip_code.R'", + "RoxygenNote": "7.1.1", + "NeedsCompilation": "no", + "Author": "Tyler Rinker [aut, cre], Josh O'Brien [ctb], Ananda Mahto [ctb], Matthew Sigal [ctb], Jonathan Carroll [ctb], Scott Westenberger [ctb]", + "Repository": "CRAN" + }, "withr": { "Package": "withr", "Version": "3.0.2",