From 03c1d59aa180d8f1bb0eef82900bfa6caa607248 Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Thu, 28 Aug 2025 16:01:43 +0100 Subject: [PATCH 1/7] Added support for Dremio. * Added Dremio docker image to the CI integration testing. * The `vertica` docker image is missing from dockerhub and is returning 404, so the vertica test is commented out. * Added python version markers to pyarrow, pandas and numpy as they each drop support for Python 3.8 so for working with Python 3.8 we need to install the last compatible version. * The cursor is the implementation in `sqlalchemy-dremio`. The current release of `sqlalchemy-dremio` (3.0.4) does not support datetime[ms]. The fix is on the master branch of `sqlalchemy-dremio` but the master branch dependency versions are not compatible with Python 3.8. To have the CI tests pass with Python 3.8, we use a fork of `sqlalchemy-dremio` that contains the fix but has compatible dependencies. --- .github/workflows/ci.yml | 18 +- .github/workflows/ci_full.yml | 10 +- README.md | 1 + docker-compose.yml | 59 ++-- docs/install.md | 2 + docs/supported-databases.md | 41 +-- poetry.lock | 552 ++++++++++++++++++++++++++++++++- pyproject.toml | 35 ++- sqeleton/databases/__init__.py | 1 + sqeleton/databases/_connect.py | 4 + sqeleton/databases/dremio.py | 215 +++++++++++++ tests/common.py | 2 + tests/test_database.py | 3 + tests/waiting_for_stack_up.sh | 26 ++ 14 files changed, 917 insertions(+), 52 deletions(-) create mode 100644 sqeleton/databases/dremio.py diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 73d9287..a1df3c1 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -1,11 +1,12 @@ name: CI-COVER-VERSIONS on: -# push: -# paths: -# - '**.py' -# - '.github/workflows/**' -# - '!dev/**' +# push: +# paths: +# - '**.py' +# - '.github/workflows/**' +# - '!dev/**' +# - '**.lock' pull_request: branches: [ master ] workflow_dispatch: @@ -34,7 +35,8 @@ jobs: python-version: ${{ matrix.python-version }} - name: Build the stack - run: docker compose up -d mysql postgres trino clickhouse vertica + # The vertica docker image is 404 + run: docker compose up -d mysql postgres trino clickhouse dremio #vertica - name: Install Poetry run: pip install poetry @@ -47,9 +49,11 @@ jobs: # PRESTO_URI: 'presto://presto@127.0.0.1/postgresql/public' TRINO_URI: 'trino://postgres@127.0.0.1:8081/postgresql/public' CLICKHOUSE_URI: 'clickhouse://clickhouse:Password1@localhost:9000/clickhouse' - VERTICA_URI: 'vertica://vertica:Password1@localhost:5433/vertica' + # The vertica docker image is 404 + #VERTICA_URI: 'vertica://vertica:Password1@localhost:5433/vertica' SNOWFLAKE_URI: '${{ secrets.SNOWFLAKE_URI }}' REDSHIFT_URI: '${{ secrets.REDSHIFT_URI }}' + DREMIO_URI: 'dremio://dremio:dremio123@localhost:32010/$scratch?UseEncryption=false' run: | chmod +x tests/waiting_for_stack_up.sh ./tests/waiting_for_stack_up.sh && TEST_ACROSS_ALL_DBS=0 poetry run unittest-parallel -j 16 diff --git a/.github/workflows/ci_full.yml b/.github/workflows/ci_full.yml index e1cd2be..649e7e1 100644 --- a/.github/workflows/ci_full.yml +++ b/.github/workflows/ci_full.yml @@ -1,11 +1,12 @@ name: CI-COVER-DATABASES on: -# push: +# push: # paths: # - '**.py' # - '.github/workflows/**' # - '!dev/**' +# - '**.lock' pull_request: branches: [ master ] workflow_dispatch: @@ -30,7 +31,8 @@ jobs: python-version: ${{ matrix.python-version }} - name: Build the stack - run: docker compose up -d mysql postgres trino clickhouse vertica + # The vertica docker image is 404 + run: docker compose up -d mysql postgres trino clickhouse dremio #vertica - name: Install Poetry run: pip install poetry @@ -43,9 +45,11 @@ jobs: # PRESTO_URI: 'presto://presto@127.0.0.1/postgresql/public' TRINO_URI: 'trino://postgres@127.0.0.1:8081/postgresql/public' CLICKHOUSE_URI: 'clickhouse://clickhouse:Password1@localhost:9000/clickhouse' - VERTICA_URI: 'vertica://vertica:Password1@localhost:5433/vertica' + # The vertica docker image is 404 + #VERTICA_URI: 'vertica://vertica:Password1@localhost:5433/vertica' SNOWFLAKE_URI: '${{ secrets.SNOWFLAKE_URI }}' REDSHIFT_URI: '${{ secrets.REDSHIFT_URI }}' + DREMIO_URI: 'dremio://dremio:dremio123@localhost:32010/$scratch?UseEncryption=false' run: | chmod +x tests/waiting_for_stack_up.sh ./tests/waiting_for_stack_up.sh && poetry run unittest-parallel -j 16 diff --git a/README.md b/README.md index acdb6d2..0ed752b 100644 --- a/README.md +++ b/README.md @@ -42,6 +42,7 @@ _Databases we fully support_: - Vertica - DuckDB >=0.6 - SQLite (coming soon) +- Dremio 💻 **Built-in SQL client**: Connect to any of the supported databases with just one line. diff --git a/docker-compose.yml b/docker-compose.yml index b5d7ae3..1012f54 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -99,31 +99,52 @@ services: networks: - local - vertica: - container_name: dd-vertica - image: vertica/vertica-ce:12.0.0-0 - restart: always - volumes: - - vertica-data:/data:delegated - ports: - - '5433:5433' - - '5444:5444' - expose: - - '5433' - - '5444' - env_file: - - dev/dev.env - tty: true - networks: - - local - +# The vertica docker image is 404 +# vertica: +# container_name: dd-vertica +# image: vertica/vertica-ce:12.0.0-0 +# restart: always +# volumes: +# - vertica-data:/data:delegated +# ports: +# - '5433:5433' +# - '5444:5444' +# expose: +# - '5433' +# - '5444' +# env_file: +# - dev/dev.env +# tty: true +# networks: +# - local + dremio: + container_name: dd-dremio + image: dremio/dremio-oss:latest + restart: always + ports: + - '9047:9047' + - '31010:31010' + - '32010:32010' + expose: + - '9047' + - '31010' + - '32010' + networks: + - local + tty: true + env_file: + - dev/dev.env + volumes: + - dremio-data:/var/lib/dremio:delegated volumes: postgresql-data: mysql-data: clickhouse-data: - vertica-data: + # The vertica docker image is 404 + #vertica-data: + dremio-data: networks: local: diff --git a/docs/install.md b/docs/install.md index cd6d06e..83155d4 100644 --- a/docs/install.md +++ b/docs/install.md @@ -26,6 +26,8 @@ To ensure that the database drivers are compatible with sqeleton, we recommend i - `pip install 'sqeleton[vertica]'` +- `pip install 'sqeleton[dremio]'` + - For BigQuery, see: https://pypi.org/project/google-cloud-bigquery/ _Some drivers have dependencies that cannot be installed using `pip` and still need to be installed manually._ diff --git a/docs/supported-databases.md b/docs/supported-databases.md index 9d4751d..3ae96e3 100644 --- a/docs/supported-databases.md +++ b/docs/supported-databases.md @@ -1,25 +1,26 @@ # List of supported databases -| Database | Status | Connection string | -|---------------|-------------------------------------------------------------------------------------------------------------------------------------|--------| -| PostgreSQL >=10 | 💚 | `postgresql://:@:5432/` | -| MySQL | 💚 | `mysql://:@:5432/` | -| Snowflake | 💚 | `"snowflake://[:]@//?warehouse=&role=[&authenticator=externalbrowser]"` | -| BigQuery | 💚 | `bigquery:///` | -| Redshift | 💚 | `redshift://:@:5439/` | -| Oracle | 💛 | `oracle://:@/database` | -| Presto | 💛 | `presto://:@:8080/` | -| Databricks | 💛 | `databricks://:@//` | -| Trino | 💛 | `trino://:@:8080/` | -| Clickhouse | 💛 | `clickhouse://:@:9000/` | -| Vertica | 💛 | `vertica://:@:5433/` | -| DuckDB | 💛 | | -| ElasticSearch | 📝 | | -| Planetscale | 📝 | | -| Pinot | 📝 | | -| Druid | 📝 | | -| Kafka | 📝 | | -| SQLite | 📝 | | +| Database | Status | Connection string | +|-----------------|-------------------------------------------------------------------------------------------------------------------------------------|---------------------------------------------------------------------------------------------------------------------------------------------------------------------| +| PostgreSQL >=10 | 💚 | `postgresql://:@:5432/` | +| MySQL | 💚 | `mysql://:@:5432/` | +| Snowflake | 💚 | `"snowflake://[:]@//?warehouse=&role=[&authenticator=externalbrowser]"` | +| BigQuery | 💚 | `bigquery:///` | +| Redshift | 💚 | `redshift://:@:5439/` | +| Oracle | 💛 | `oracle://:@/database` | +| Presto | 💛 | `presto://:@:8080/` | +| Databricks | 💛 | `databricks://:@//` | +| Trino | 💛 | `trino://:@:8080/` | +| Clickhouse | 💛 | `clickhouse://:@:9000/` | +| Vertica | 💛 | `vertica://:@:5433/` | +| DuckDB | 💛 | | +| Dremio | 💛 | `dremio://[:]@:32010/?Token=&UseEncryption=&DisableCertificateVerification=` | +| ElasticSearch | 📝 | | +| Planetscale | 📝 | | +| Pinot | 📝 | | 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["cx_oracle (>=8)"] +oracle-oracledb = ["oracledb (>=1.0.1)"] +postgresql = ["psycopg2 (>=2.7)"] +postgresql-asyncpg = ["asyncpg", "greenlet (>=1)"] +postgresql-pg8000 = ["pg8000 (>=1.29.1)"] +postgresql-psycopg = ["psycopg (>=3.0.7)"] +postgresql-psycopg2binary = ["psycopg2-binary"] +postgresql-psycopg2cffi = ["psycopg2cffi"] +postgresql-psycopgbinary = ["psycopg[binary] (>=3.0.7)"] +pymysql = ["pymysql"] +sqlcipher = ["sqlcipher3_binary"] + +[[package]] +name = "sqlalchemy_dremio" +version = "3.0.6" +description = "A SQLAlchemy dialect for Dremio via the Flight interface." +optional = false +python-versions = "*" +files = [] +develop = false + +[package.dependencies] +pyarrow = [ + {version = ">=18.0.0", markers = "python_version >= \"3.9\""}, + {version = "<18.0.0", markers = "python_version < \"3.9\""}, +] +sqlalchemy = ">=1.3.24" + +[package.source] +type = "git" +url = "https://github.com/scottkwalker/sqlalchemy_dremio" +reference = "308e686b166787941180850ce5813c313d3a9985" +resolved_reference = "308e686b166787941180850ce5813c313d3a9985" + [[package]] name = "textual" version = "0.73.0" @@ -1293,6 +1842,7 @@ files = [ [extras] clickhouse = ["clickhouse-driver"] databricks = [] +dremio = ["pandas", "pandas", "pyarrow", "pyarrow", "sqlalchemy-dremio"] duckdb = ["duckdb"] mysql = ["mysql-connector-python"] oracle = [] @@ -1306,4 +1856,4 @@ vertica = [] [metadata] lock-version = "2.0" python-versions = "^3.8" -content-hash = "47969195ee2be5c1237a38822b1c000302bf5bb6bb123dcb5afbb1c22923247f" +content-hash = "90ebce8b86480ed19c1ea6fd051a2f0d6a502b31f7df827e321f16590fbb92cc" diff --git a/pyproject.toml b/pyproject.toml index 33a1844..7aa2a4f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "sqeleton" -version = "0.1.7" +version = "0.1.8" description = "Python library for querying SQL databases" authors = ["Erez Shinan "] license = "MIT" @@ -41,6 +41,21 @@ textual = {version=">=0.9.1", optional=true} textual-select = {version="*", optional=true} pygments = {version=">=2.13.0", optional=true} prompt-toolkit = {version=">=3.0.36", optional=true} +pyarrow = [ + {version=">=18.0.0", markers="python_version >= '3.9'", optional=true}, + {version="<18.0.0", markers="python_version < '3.9'", optional=true}, +] +pandas = [ + {version=">=2.1", markers="python_version >= '3.9'", optional=true}, + {version="*", markers="python_version < '3.9'", optional=true}, +] +numpy = [ + {version=">=1.26.4", markers="python_version >= '3.9'", optional=true}, + {version=">=1.24.4", markers="python_version < '3.9'", optional=true}, +] +# sqlalchemy-dremio 3.0.4 is missing a type conversion for datetime[ms] and is not compatible with Python 3.8. Created a +# fork with a fix and opening a PR. +sqlalchemy-dremio = {git = "https://github.com/scottkwalker/sqlalchemy_dremio", rev="308e686b166787941180850ce5813c313d3a9985", optional=true} [tool.poetry.dev-dependencies] parameterized = "*" @@ -56,6 +71,22 @@ trino = ">=0.314.0" presto-python-client = "*" clickhouse-driver = "*" vertica-python = "*" +pyarrow = [ + {version=">=18.0.0", markers="python_version >= '3.9'"}, + {version="<18.0.0", markers="python_version < '3.9'"}, +] +pandas = [ + {version=">=2.1", markers="python_version >= '3.9'"}, + {version="*", markers="python_version < '3.9'"}, +] +numpy = [ + {version=">=1.26.4", markers="python_version >= '3.9'"}, + {version=">=1.24.4", markers="python_version < '3.9'"}, +] +# sqlalchemy-dremio 3.0.4 is missing a type conversion for datetime[ms] and is not compatible with Python 3.8. Created a +# fork with a fix and opening a PR. +sqlalchemy-dremio = {git = "https://github.com/scottkwalker/sqlalchemy_dremio", rev="308e686b166787941180850ce5813c313d3a9985"} + [tool.poetry.extras] mysql = ["mysql-connector-python"] @@ -69,6 +100,7 @@ clickhouse = ["clickhouse-driver"] vertica = ["vertica-python"] duckdb = ["duckdb"] tui = ["textual", "textual-select", "pygments", "prompt-toolkit"] +dremio = ["sqlalchemy-dremio", "pandas", "pyarrow"] [build-system] requires = ["poetry-core>=1.0.0"] @@ -80,4 +112,3 @@ sqeleton = 'sqeleton.__main__:main' [tool.ruff] line-length = 120 target-version = "py38" - diff --git a/sqeleton/databases/__init__.py b/sqeleton/databases/__init__.py index b0c8f1f..6da5dd6 100644 --- a/sqeleton/databases/__init__.py +++ b/sqeleton/databases/__init__.py @@ -14,5 +14,6 @@ from .clickhouse import Clickhouse from .vertica import Vertica from .duckdb import DuckDB +from .dremio import Dremio connect = Connect() diff --git a/sqeleton/databases/_connect.py b/sqeleton/databases/_connect.py index 40d9bfe..e1af62c 100644 --- a/sqeleton/databases/_connect.py +++ b/sqeleton/databases/_connect.py @@ -22,6 +22,7 @@ from .clickhouse import Clickhouse from .vertica import Vertica from .duckdb import DuckDB +from .dremio import Dremio @dataclass @@ -87,6 +88,7 @@ def match_path(self, dsn): "trino": Trino, "clickhouse": Clickhouse, "vertica": Vertica, + "dremio": Dremio, } @@ -132,6 +134,7 @@ def connect_to_uri(self, db_uri: str, thread_count: Optional[int] = 1) -> Databa - clickhouse - vertica - duckdb + - dremio """ dsn = dsnparse.parse(db_uri) @@ -247,6 +250,7 @@ def __call__(self, db_conf: Union[str, dict], thread_count: Optional[int] = 1, s - trino - clickhouse - vertica + - dremio Example: >>> connect("mysql://localhost/db") diff --git a/sqeleton/databases/dremio.py b/sqeleton/databases/dremio.py new file mode 100644 index 0000000..ce77209 --- /dev/null +++ b/sqeleton/databases/dremio.py @@ -0,0 +1,215 @@ +from typing import Optional, Union + +from sqeleton.queries import this, SKIP +from .base import BaseDialect, QueryResult, import_helper, parse_table_name, ThreadLocalInterpreter, \ + Mixin_RandomSample, logger, ThreadedDatabase, Mixin_Schema, TIMESTAMP_PRECISION_POS +from ..abcs import Compilable +from ..abcs.database_types import ( + Timestamp, + Integer, + Float, + Text, + FractionalType, + Date, + DbPath, + DbTime, + Decimal, + ColType, + TemporalType, + Boolean, + ColType_UUID +) +from ..abcs.mixins import AbstractMixin_NormalizeValue, AbstractMixin_MD5 +from ..queries.compiler import CompiledCode + + +def query_cursor(c, sql_code: CompiledCode) -> Optional[QueryResult]: + logger.debug(f"[Dremio] Executing SQL: {sql_code.code} || {sql_code.args}") + c.execute(sql_code.code, sql_code.args) + + columns = c.description and [col[0] for col in c.description] + return QueryResult(c.fetchall(), columns) + + +@import_helper("dremio") +def import_dremio(): + import sqlalchemy + + return sqlalchemy + + +class Mixin_MD5(AbstractMixin_MD5): + def md5_as_int(self, s: str) -> str: + return f"CAST(CONV(SUBSTR(MD5({s}), 18), 16, 10) AS BIGINT)" + + +class Mixin_NormalizeValue(AbstractMixin_NormalizeValue): + + def normalize_uuid(self, value: str, coltype: ColType_UUID) -> str: + # Trim doesn't work on CHAR type + return f"TRIM(CAST({value} AS VARCHAR))" + + def normalize_timestamp(self, value: str, coltype: TemporalType) -> str: + """Dremio timestamp contains no more than 6 digits in precision""" + precision_format = ('F' * coltype.precision) if coltype.precision > 0 else '' + return f"rpad(TO_CHAR(CAST({value} AS TIMESTAMP), 'YYYY-MM-DD HH24:MI:SS.{precision_format}'), {TIMESTAMP_PRECISION_POS + 6}, '0')" + + def normalize_number(self, value: str, coltype: FractionalType) -> str: + if coltype.precision > 0: + value = f"format_number({value}, {coltype.precision})" + return f"replace({self.to_string(value)}, ',', '')" + + def normalize_boolean(self, value: str, _coltype: Boolean) -> str: + return self.to_string(f"cast({value} as int)") + +class Dialect(BaseDialect, Mixin_Schema): + name = "Dremio" + ROUNDS_ON_PREC_LOSS = False # False if it truncates. + ARG_SYMBOL = None # Not implemented by Dremio + TYPE_CLASSES = { + # https://docs.dremio.com/current/reference/sql/data-types/ + # com.dremio.dac.explore.DataTypeUtil + "BOOLEAN": Boolean, + "INT": Integer, + "INTEGER": Integer, + "TINYINT": Integer, # An alias for Integer. + "SMALLINT": Integer, # An alias for Integer. + "BIGINT": Integer, + "DECIMAL": Decimal, + "DEC": Decimal, # An alias for Decimal. + "NUMERIC": Decimal, # An alias for Decimal. + "FLOAT": Float, + "DOUBLE": Float, + "REAL": Float, + "DATE": Date, + "TIME": Timestamp, + "TIMESTAMP": Timestamp, # Dremio does not support timezone-aware timestamps. + "CHAR": Text, + "CHARACTER": Text, + "VARCHAR": Text, + "CHARACTER VARYING": Text, # An alias for VARCHAR. + "VARBINARY": Text, + "BINARY VARYING": Text, # An alias for VARBINARY. + } + MIXINS = {Mixin_Schema, Mixin_MD5, Mixin_NormalizeValue, Mixin_RandomSample} + + def list_tables(self, table_schema: str, like: Compilable = None) -> Compilable: + """Query to select the list of tables in the schema. (query return type: table[str]) + + If 'like' is specified, the value is applied to the table name, using the 'like' operator. + """ + return ( + self.table_information() + .where( + this.table_schema == table_schema, + this.table_name.like(like) if like is not None else SKIP, + ) + .select(this.table_name) + ) + + def timestamp_value(self, t: DbTime) -> str: + s = t.isoformat(' ', 'milliseconds') + return f"cast('{s}' as timestamp)" + + def quote(self, s: str): + return f'"{s}"' + + def to_string(self, s: str): + return f"cast({s} as varchar)" + + def parse_type( + self, + table_path: DbPath, + col_name: str, + type_repr: str, + datetime_precision: int = None, + numeric_precision: int = None, + numeric_scale: int = None, + ) -> ColType: + from math import isnan + if datetime_precision is not None and not isinstance(datetime_precision, int): + if isnan(datetime_precision): + datetime_precision = None + else: + datetime_precision = int(datetime_precision) + if numeric_precision is not None and not isinstance(numeric_precision, int): + if isnan(numeric_precision): + numeric_precision = None + else: + numeric_precision = int(numeric_precision) + if numeric_scale is not None and not isinstance(numeric_scale, int): + if isnan(numeric_scale): + numeric_scale = None + else: + numeric_scale = int(numeric_scale) + + return super().parse_type(table_path, col_name, type_repr, datetime_precision, numeric_precision, numeric_scale) + + def set_timezone_to_utc(self) -> str: + raise NotImplementedError( + 'Dremio does not support setting session timezone to UTC. Dremio retrieves the time or timestamp value ' + 'with the assumption that the time zone is in Coordinated Universal Time (UTC). Use CONVERT_TIMEZONE in ' + 'queries instead.' + ) + + def type_repr(self, t) -> str: + repr = super().type_repr(t) + return repr + + +class Dremio(ThreadedDatabase): + dialect = Dialect() + CONNECT_URI_HELP = ("dremio://[:]@:/?" + "Token=&" + "UseEncryption=&" + "DisableCertificateVerification=") + CONNECT_URI_PARAMS = ['space?', 'Token?', 'UseEncryption?', 'DisableCertificateVerification?'] + + def __init__(self, thread_count, **kw): + self._args = kw + if 'space' in self._args: + self.default_schema = self._args['space'] + super().__init__(thread_count=thread_count) + + def create_connection(self): + # Dremio PAT token is preferred over password. It must be URL-encoded as it will contain special characters. + password_or_token = self._args.get('Token') if self._args.get('Token') else self._args.get('password') + user_pw_str = f"{self._args.get('user')}:{password_or_token}@" + keywords = [] + if 'UseEncryption' in self._args: + keywords.append(f"UseEncryption={self._args['UseEncryption']}") + if 'DisableCertificateVerification' in self._args: + keywords.append(f"DisableCertificateVerification={self._args['DisableCertificateVerification']}") + keyword_str = '?' + '&'.join(keywords) if keywords else '' + + connection_string = (f"dremio+flight://{user_pw_str}{self._args['host']}:{self._args['port']}/" + f"{self.default_schema}{keyword_str}") + + dremiodb = import_dremio() + engine: dremiodb.Engine = dremiodb.create_engine(url=connection_string, echo=True) + + try: + connection: dremiodb.engine.Connection = engine.connect() + except dremiodb.exc.SQLAlchemyError as e: + raise ConnectionError(*e.args) from e + + return connection.connection + + def _query(self, sql_code: Union[str, ThreadLocalInterpreter]): + "Uses the standard SQL cursor interface" + from pyarrow._flight import FlightUnauthenticatedError + try: + return super()._query(sql_code=sql_code) + except FlightUnauthenticatedError as e: + raise ValueError( + 'Possible reasons - Your TOKEN may have expired in the Dremio -> Account Settings -> Personal Access ' + 'Token page. Or you have not provided a username that matches the Personal Access Token: {e}' + ) from e + + def parse_table_name(self, name: str) -> DbPath: + path = parse_table_name(name) + return tuple(i for i in self._normalize_table_path(path) if i is not None) + + @property + def is_autocommit(self) -> bool: + return True diff --git a/tests/common.py b/tests/common.py index bf8b80c..82c8487 100644 --- a/tests/common.py +++ b/tests/common.py @@ -33,6 +33,7 @@ # vertica uri provided for docker - "vertica://vertica:Password1@localhost:5433/vertica" TEST_VERTICA_CONN_STRING: str = os.environ.get("VERTICA_URI") TEST_DUCKDB_CONN_STRING: str = "duckdb://main:@:memory:" +TEST_DREMIO_CONN_STRING: str = os.environ.get("DREMIO_URI") or None DEFAULT_N_SAMPLES = 50 @@ -74,6 +75,7 @@ def get_git_revision_short_hash() -> str: db.Clickhouse: TEST_CLICKHOUSE_CONN_STRING, db.Vertica: TEST_VERTICA_CONN_STRING, db.DuckDB: TEST_DUCKDB_CONN_STRING, + db.Dremio: TEST_DREMIO_CONN_STRING, } _database_instances = {} diff --git a/tests/test_database.py b/tests/test_database.py index 461e9b5..a5b47a8 100644 --- a/tests/test_database.py +++ b/tests/test_database.py @@ -22,6 +22,7 @@ dbs.Presto, dbs.Trino, dbs.Vertica, + dbs.Dremio, } test_each_database: Callable = make_test_each_database_in_list(TEST_DATABASES) @@ -104,6 +105,8 @@ def test_current_timestamp(self): assert isinstance(res, datetime), (res, type(res)) def test_correct_timezone(self): + if self.db_cls in [dbs.Dremio]: + self.skipTest("No support for timezones.") name = "tbl_" + random_table_suffix() db = get_conn(self.db_cls) tbl = table(name, schema={"id": int, "created_at": TimestampTZ(9), "updated_at": TimestampTZ(9)}) diff --git a/tests/waiting_for_stack_up.sh b/tests/waiting_for_stack_up.sh index a085c76..b4a8997 100644 --- a/tests/waiting_for_stack_up.sh +++ b/tests/waiting_for_stack_up.sh @@ -15,3 +15,29 @@ if [ -n "$VERTICA_URI" ] fi done fi + +if [ -n "${DREMIO_URI}" ] + then + echo "Check Dremio DB running..." + docker ps + + while true + do + if docker logs dd-dremio | tail -n 1000 | grep -q -i "Dremio Daemon Started as master" + then + echo "Dremio DB is ready"; + break; + else + echo "Waiting for Dremio DB starting..."; + sleep 10; + fi + done + + echo "Create first user in Dremio DB..." + curl 'http://localhost:9047/apiv2/bootstrap/firstuser' -X PUT \ + -H 'Authorization: _dremionull' -H 'Content-Type: application/json' \ + --data-binary \ + '{"userName":"dremio","firstName":"your_fname","lastName":"your_lname","email":"your_email","password":"dremio123"}' + + echo "Dremio DB is ready"; +fi \ No newline at end of file From 51ba35a65af67d4f1cb55e066330139b0966f35d Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Fri, 26 Sep 2025 14:07:30 +0100 Subject: [PATCH 2/7] Removed unnecessary func. --- sqeleton/databases/dremio.py | 4 ---- 1 file changed, 4 deletions(-) diff --git a/sqeleton/databases/dremio.py b/sqeleton/databases/dremio.py index ce77209..cb999e6 100644 --- a/sqeleton/databases/dremio.py +++ b/sqeleton/databases/dremio.py @@ -152,10 +152,6 @@ def set_timezone_to_utc(self) -> str: 'queries instead.' ) - def type_repr(self, t) -> str: - repr = super().type_repr(t) - return repr - class Dremio(ThreadedDatabase): dialect = Dialect() From f63e25a64ec1733f7fd8ee74935d69582db33e00 Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Fri, 26 Sep 2025 14:19:33 +0100 Subject: [PATCH 3/7] Add function nan_to_none --- sqeleton/databases/dremio.py | 27 +++++++++++---------------- 1 file changed, 11 insertions(+), 16 deletions(-) diff --git a/sqeleton/databases/dremio.py b/sqeleton/databases/dremio.py index cb999e6..22007e2 100644 --- a/sqeleton/databases/dremio.py +++ b/sqeleton/databases/dremio.py @@ -117,6 +117,14 @@ def quote(self, s: str): def to_string(self, s: str): return f"cast({s} as varchar)" + @staticmethod + def nan_to_none(value: Optional[object]) -> Optional[int]: + from math import isnan + if value is not None and not isinstance(value, int): + return None if isnan(value) else int(value) + else: + return value + def parse_type( self, table_path: DbPath, @@ -126,22 +134,9 @@ def parse_type( numeric_precision: int = None, numeric_scale: int = None, ) -> ColType: - from math import isnan - if datetime_precision is not None and not isinstance(datetime_precision, int): - if isnan(datetime_precision): - datetime_precision = None - else: - datetime_precision = int(datetime_precision) - if numeric_precision is not None and not isinstance(numeric_precision, int): - if isnan(numeric_precision): - numeric_precision = None - else: - numeric_precision = int(numeric_precision) - if numeric_scale is not None and not isinstance(numeric_scale, int): - if isnan(numeric_scale): - numeric_scale = None - else: - numeric_scale = int(numeric_scale) + datetime_precision = self.nan_to_none(datetime_precision) + numeric_precision = self.nan_to_none(numeric_precision) + numeric_scale = self.nan_to_none(numeric_scale) return super().parse_type(table_path, col_name, type_repr, datetime_precision, numeric_precision, numeric_scale) From ec500c50160cf0b3c2bc7493d2234fba52348e1b Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Fri, 26 Sep 2025 14:22:10 +0100 Subject: [PATCH 4/7] move import to top --- sqeleton/databases/dremio.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sqeleton/databases/dremio.py b/sqeleton/databases/dremio.py index 22007e2..d4535c0 100644 --- a/sqeleton/databases/dremio.py +++ b/sqeleton/databases/dremio.py @@ -1,3 +1,4 @@ +from math import isnan from typing import Optional, Union from sqeleton.queries import this, SKIP @@ -119,7 +120,6 @@ def to_string(self, s: str): @staticmethod def nan_to_none(value: Optional[object]) -> Optional[int]: - from math import isnan if value is not None and not isinstance(value, int): return None if isnan(value) else int(value) else: From aa1eec9d4bd58e0c62768304e0507d4cecf24b16 Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Fri, 26 Sep 2025 14:33:24 +0100 Subject: [PATCH 5/7] test correct timezone --- tests/test_database.py | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/tests/test_database.py b/tests/test_database.py index a5b47a8..6160a92 100644 --- a/tests/test_database.py +++ b/tests/test_database.py @@ -105,8 +105,6 @@ def test_current_timestamp(self): assert isinstance(res, datetime), (res, type(res)) def test_correct_timezone(self): - if self.db_cls in [dbs.Dremio]: - self.skipTest("No support for timezones.") name = "tbl_" + random_table_suffix() db = get_conn(self.db_cls) tbl = table(name, schema={"id": int, "created_at": TimestampTZ(9), "updated_at": TimestampTZ(9)}) @@ -121,7 +119,8 @@ def test_correct_timezone(self): now = now.replace(microsecond=ms) db.query(tbl.insert_row(1, now, now)) - db.query(db.dialect.set_timezone_to_utc()) + if self.db_cls not in [dbs.Dremio]: + db.query(db.dialect.set_timezone_to_utc()) t = db.table(tbl).query_schema() t.schema["created_at"] = t.schema["created_at"].replace(precision=t.schema["created_at"].precision) From a5656ebb02c217a1759983583815f2cf5637cf27 Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Fri, 26 Sep 2025 14:55:51 +0100 Subject: [PATCH 6/7] test correct timezone with precision 3 --- tests/test_database.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/test_database.py b/tests/test_database.py index 6160a92..261be8a 100644 --- a/tests/test_database.py +++ b/tests/test_database.py @@ -114,7 +114,7 @@ def test_correct_timezone(self): tz = pytz.timezone("Europe/Berlin") now = datetime.now(tz) - if isinstance(db, dbs.Presto): + if isinstance(db, dbs.Presto) or isinstance(db, dbs.Dremio): ms = now.microsecond // 1000 * 1000 # Presto max precision is 3 now = now.replace(microsecond=ms) From 2e8f5f568c318b8a0f3c2981570d236ec9dc08c7 Mon Sep 17 00:00:00 2001 From: Scott Walker Date: Mon, 29 Sep 2025 11:58:15 +0100 Subject: [PATCH 7/7] replace set_timezone_to_utc with a pass --- sqeleton/databases/dremio.py | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/sqeleton/databases/dremio.py b/sqeleton/databases/dremio.py index d4535c0..8e6829b 100644 --- a/sqeleton/databases/dremio.py +++ b/sqeleton/databases/dremio.py @@ -141,11 +141,12 @@ def parse_type( return super().parse_type(table_path, col_name, type_repr, datetime_precision, numeric_precision, numeric_scale) def set_timezone_to_utc(self) -> str: - raise NotImplementedError( - 'Dremio does not support setting session timezone to UTC. Dremio retrieves the time or timestamp value ' - 'with the assumption that the time zone is in Coordinated Universal Time (UTC). Use CONVERT_TIMEZONE in ' - 'queries instead.' - ) + """Dremio does not support setting session timezone to UTC. Dremio retrieves the time or timestamp value + with the assumption that the time zone is in Coordinated Universal Time (UTC). Use CONVERT_TIMEZONE in + queries instead. + """ + pass + class Dremio(ThreadedDatabase):