From 9620a78e550e60f93b669f928fcc73ebff638637 Mon Sep 17 00:00:00 2001 From: Roirtur Date: Mon, 20 Apr 2026 16:57:33 +0200 Subject: [PATCH 1/4] uvicorn not downloadable this way, now imports fastapi standard instead --- setup.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/setup.py b/setup.py index 5bf8e4c..135b00d 100644 --- a/setup.py +++ b/setup.py @@ -25,7 +25,7 @@ "sqlalchemy>=2.0", "tinydb==4.8.0", "toml>=0.10.2", - # "torch>=1.7.1", + #"torch>=1.7.1", "urllib3==2.2.1", "watchdog>=4.0.0", "annotated-types==0.6.0", @@ -46,7 +46,7 @@ "watchfiles", "scikit-learn", "opencv-python", - "fastapi[uvicorn]", + "fastapi[standard]", "umap-learn" ], "docking":[ From 6cd1e7cd850ee0c95696644471835ebef1261afe Mon Sep 17 00:00:00 2001 From: Roirtur Date: Mon, 20 Apr 2026 16:58:45 +0200 Subject: [PATCH 2/4] added " to import in readme --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index f4306b4..8ca47a8 100644 --- a/README.md +++ b/README.md @@ -79,7 +79,7 @@ Available examples are: To execute examples, you need to install required dependencies: ```bash -pip install .[examples] +pip install ".[examples]" ``` First launch video [Grayscott example](https://youtu.be/5iHzTO7yhuQ) @@ -100,7 +100,7 @@ To reload a previous exploration, simply run the same previous commands but from ### Visualization The tool provides a web interface to visualize the progression of the exploration. To start the web interface, run the following commands: ```bash -pip install .[visu] +pip install ".[visu]" cd examples/visu python3 server.py --discoveries PATH_TO_DISCOVERIES ``` From 9aa2f7b9c8eda67b1a9d9271aa5f0fcb14932c9d Mon Sep 17 00:00:00 2001 From: Roirtur Date: Tue, 28 Apr 2026 15:58:49 +0200 Subject: [PATCH 3/4] Reverted readme since it depends on cli --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 8ca47a8..f4306b4 100644 --- a/README.md +++ b/README.md @@ -79,7 +79,7 @@ Available examples are: To execute examples, you need to install required dependencies: ```bash -pip install ".[examples]" +pip install .[examples] ``` First launch video [Grayscott example](https://youtu.be/5iHzTO7yhuQ) @@ -100,7 +100,7 @@ To reload a previous exploration, simply run the same previous commands but from ### Visualization The tool provides a web interface to visualize the progression of the exploration. To start the web interface, run the following commands: ```bash -pip install ".[visu]" +pip install .[visu] cd examples/visu python3 server.py --discoveries PATH_TO_DISCOVERIES ``` From 222284e23a15909c262403895d5a6fbb9230af44 Mon Sep 17 00:00:00 2001 From: Roirtur Date: Tue, 28 Apr 2026 16:00:05 +0200 Subject: [PATCH 4/4] Add initial __init__.py files for expose_config, interaction, leafutils, and leafintegrations modules --- adtool/utils/expose_config/__init__.py | 0 adtool/utils/interaction/__init__.py | 0 adtool/utils/leafutils/__init__.py | 0 adtool/utils/leafutils/leafintegrations/__init__.py | 0 4 files changed, 0 insertions(+), 0 deletions(-) create mode 100644 adtool/utils/expose_config/__init__.py create mode 100644 adtool/utils/interaction/__init__.py create mode 100644 adtool/utils/leafutils/__init__.py create mode 100644 adtool/utils/leafutils/leafintegrations/__init__.py diff --git a/adtool/utils/expose_config/__init__.py b/adtool/utils/expose_config/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/adtool/utils/interaction/__init__.py b/adtool/utils/interaction/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/adtool/utils/leafutils/__init__.py b/adtool/utils/leafutils/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/adtool/utils/leafutils/leafintegrations/__init__.py b/adtool/utils/leafutils/leafintegrations/__init__.py new file mode 100644 index 0000000..e69de29