DESCRIPTION

Package: VariantAnnotation
Type: Package
Title: Annotation of Genetic Variants
Description: Annotate variants, compute amino acid coding changes,
        predict coding outcomes.
Version: 1.55.0
Authors@R: c(
        person("Valerie", "Oberchain", role="aut"),
        person("Martin", "Morgan", role="aut"),
        person("Michael", "Lawrence", role="aut"),
        person("Stephanie", "Gogarten", role="ctb"),
        person("Bioconductor Package Maintainer", role="cre",
                email="maintainer@bioconductor.org"))
License: Artistic-2.0
Depends: R (>= 4.0.0), methods, BiocGenerics (>= 0.37.0), MatrixGenerics,
        GenomeInfoDb (>= 1.15.2), GenomicRanges (>= 1.41.5),
        SummarizedExperiment (>= 1.19.5), Rsamtools (>= 2.19.1)
Imports: utils, DBI, Biobase, S4Vectors (>= 0.27.12),
        IRanges (>= 2.23.9), XVector (>= 0.29.2), Biostrings (>= 2.57.2),
        AnnotationDbi (>= 1.27.9), rtracklayer (>= 1.39.7),
        BSgenome (>= 1.47.3), GenomicFeatures (>= 1.31.3)
Suggests: RUnit, AnnotationHub, BSgenome.Hsapiens.UCSC.hg19,
        TxDb.Hsapiens.UCSC.hg19.knownGene,
        SNPlocs.Hsapiens.dbSNP144.GRCh37, SIFT.Hsapiens.dbSNP132,
        SIFT.Hsapiens.dbSNP137, PolyPhen.Hsapiens.dbSNP131, snpStats,
        ggplot2, BiocStyle, knitr, magick, jsonlite, httr,
	rjsoncons
LinkingTo: S4Vectors, IRanges, XVector, Biostrings, Rhtslib (>= 2.99.0)
SystemRequirements: GNU make
LazyLoad: yes
biocViews: DataImport, Sequencing, SNP, Annotation,
        Genetics, VariantAnnotation
Video: https://www.youtube.com/watch?v=Ro0lHQ_J--I&list=UUqaMSQd_h-2EDGsU6WDiX0Q
RoxygenNote: 7.3.1
VignetteBuilder: knitr