From 29281f7530d500df0de5f26763d61ce47aa075a0 Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 01:13:05 +0300 Subject: [PATCH 1/9] Update citation --- CITATION.bib | 14 +++++++++----- README.md | 14 +++++++++----- docs/index.rst | 14 +++++++++----- notebooks/Graph.ipynb | 14 +++++++++----- notebooks/GraphEdges.ipynb | 14 +++++++++----- notebooks/HammingGraph.ipynb | 14 +++++++++----- notebooks/Hyperbolic.ipynb | 14 +++++++++----- notebooks/HypercubeGraph.ipynb | 14 +++++++++----- notebooks/Hypersphere.ipynb | 14 +++++++++----- notebooks/Mesh.ipynb | 14 +++++++++----- notebooks/SPD.ipynb | 14 +++++++++----- notebooks/SpecialOrthogonal.ipynb | 14 +++++++++----- notebooks/SpecialUnitary.ipynb | 14 +++++++++----- notebooks/Torus.ipynb | 14 +++++++++----- notebooks/backends/JAX_Graph.ipynb | 14 +++++++++----- notebooks/backends/PyTorch_Graph.ipynb | 14 +++++++++----- notebooks/backends/TensorFlow_Graph.ipynb | 14 +++++++++----- notebooks/frontends/GPJax.ipynb | 14 +++++++++----- notebooks/frontends/GPflow.ipynb | 14 +++++++++----- notebooks/frontends/GPyTorch.ipynb | 14 +++++++++----- notebooks/other/Bayesian Optimization.ipynb | 14 +++++++++----- notebooks/other/HammingGraphTiming.ipynb | 14 +++++++++----- notebooks/other/Hyperbolic Approximations.ipynb | 14 +++++++++----- notebooks/other/SPD Approximations.ipynb | 14 +++++++++----- 24 files changed, 216 insertions(+), 120 deletions(-) diff --git a/CITATION.bib b/CITATION.bib index a729e293..7df740b3 100644 --- a/CITATION.bib +++ b/CITATION.bib @@ -1,6 +1,10 @@ -@article{mostowsky2024, - title = {The GeometricKernels Package: Heat and Matérn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs}, - author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and Noémie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy}, - year = {2024}, - journal = {arXiv:2407.08086}, +@article{JMLR:v26:24-1185, + author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy}, + title = {The GeometricKernels Package: Heat and Mat{\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs}, + journal = {Journal of Machine Learning Research}, + year = {2025}, + volume = {26}, + number = {276}, + pages = {1--14}, + url = {http://jmlr.org/papers/v26/24-1185.html} } \ No newline at end of file diff --git a/README.md b/README.md index 5c5e4ae4..e310ab46 100644 --- a/README.md +++ b/README.md @@ -200,11 +200,15 @@ This [link](https://github.com/geometric-kernels/GeometricKernels/issues/new?ass If you are using GeometricKernels, please cite the following [paper](https://arxiv.org/pdf/2407.08086): ``` -@article{mostowsky2024, - title = {The GeometricKernels Package: Heat and Matérn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs}, - author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and Noémie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy}, - year = {2024}, - journal = {arXiv:2407.08086}, +@article{JMLR:v26:24-1185, + author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy}, + title = {The GeometricKernels Package: Heat and Mat{\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs}, + journal = {Journal of Machine Learning Research}, + year = {2025}, + volume = {26}, + number = {276}, + pages = {1--14}, + url = {http://jmlr.org/papers/v26/24-1185.html} } ``` diff --git a/docs/index.rst b/docs/index.rst index 3cb2824c..139543ab 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -418,11 +418,15 @@ If you are using GeometricKernels, please cite the `library paper Date: Tue, 10 Mar 2026 01:32:30 +0300 Subject: [PATCH 2/9] Constrain tensorflow version from above tensorflow==2.21.0 makes tf-keras fail at import --- pyproject.toml | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index cd5db34f..7af24135 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -94,11 +94,10 @@ dev = [ "botorch>=0.9", # TensorFlow / GPflow / TFP split - 'tensorflow', - 'tensorflow-probability; python_version < "3.12"', - 'tensorflow-probability>=0.25; python_version >= "3.12"', + 'tensorflow<=2.20.0', + 'tensorflow-probability<=0.25.0', 'gpflow', - 'tf_keras', + 'tf_keras<=2.20.1', # JAX family 'jax', From 7fea2ebaf85ed3448ed2183653f9efde36782ca8 Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 01:36:57 +0300 Subject: [PATCH 3/9] Bump version --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 7af24135..564c0502 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -34,7 +34,7 @@ dependencies = [ "spherical-harmonics-basis", "sympy~=1.13", ] -version="0.4.2" +version="1.0.0" [project.urls] Documentation = "https://geometric-kernels.github.io/" From a7a45300f5a54aed0014bfc23d3792fa6e6908c7 Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 01:40:51 +0300 Subject: [PATCH 4/9] Update CHANGELOG.md --- CHANGELOG.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index cd176bbb..d6fe23d0 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,12 @@ # CHANGELOG +## v0.0.1 - 11.03.2026 +Stable release! + +The package is deemed stable which is corroborated by the fact the +package paper was [published](https://jmlr.org/papers/v26/24-1185.html) in JMLR! +Please consider citing us if you use this package. + ## v0.4.2 - 11.02.2026 Maintance release (https://github.com/geometric-kernels/GeometricKernels/pull/173). * Fix compatibility with modern `plum-dispatch`/`numpy`. From dbba8ca4a23acb9007db4a6760a4218f72e7fd00 Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 01:49:49 +0300 Subject: [PATCH 5/9] Fix citation --- README.md | 2 +- notebooks/Graph.ipynb | 2 +- notebooks/GraphEdges.ipynb | 2 +- notebooks/HammingGraph.ipynb | 2 +- notebooks/Hyperbolic.ipynb | 2 +- notebooks/HypercubeGraph.ipynb | 2 +- notebooks/Hypersphere.ipynb | 2 +- notebooks/Mesh.ipynb | 2 +- notebooks/SPD.ipynb | 2 +- notebooks/SpecialOrthogonal.ipynb | 2 +- notebooks/SpecialUnitary.ipynb | 2 +- notebooks/Torus.ipynb | 2 +- notebooks/backends/JAX_Graph.ipynb | 2 +- notebooks/backends/PyTorch_Graph.ipynb | 2 +- notebooks/backends/TensorFlow_Graph.ipynb | 2 +- notebooks/frontends/GPJax.ipynb | 2 +- notebooks/frontends/GPflow.ipynb | 2 +- notebooks/frontends/GPyTorch.ipynb | 2 +- notebooks/other/Bayesian Optimization.ipynb | 2 +- notebooks/other/HammingGraphTiming.ipynb | 2 +- notebooks/other/Hyperbolic Approximations.ipynb | 2 +- notebooks/other/SPD Approximations.ipynb | 2 +- 22 files changed, 22 insertions(+), 22 deletions(-) diff --git a/README.md b/README.md index e310ab46..218df743 100644 --- a/README.md +++ b/README.md @@ -198,7 +198,7 @@ This [link](https://github.com/geometric-kernels/GeometricKernels/issues/new?ass ## Citation -If you are using GeometricKernels, please cite the following [paper](https://arxiv.org/pdf/2407.08086): +If you are using GeometricKernels, please cite the following [paper](https://jmlr.org/papers/volume26/24-1185/24-1185.pdf): ``` @article{JMLR:v26:24-1185, author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy}, diff --git a/notebooks/Graph.ipynb b/notebooks/Graph.ipynb index 54bf9efa..937e1306 100644 --- a/notebooks/Graph.ipynb +++ b/notebooks/Graph.ipynb @@ -823,7 +823,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/GraphEdges.ipynb b/notebooks/GraphEdges.ipynb index e15be557..4997f0f2 100644 --- a/notebooks/GraphEdges.ipynb +++ b/notebooks/GraphEdges.ipynb @@ -1076,7 +1076,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/HammingGraph.ipynb b/notebooks/HammingGraph.ipynb index 1332b111..1c3a0650 100644 --- a/notebooks/HammingGraph.ipynb +++ b/notebooks/HammingGraph.ipynb @@ -696,7 +696,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/Hyperbolic.ipynb b/notebooks/Hyperbolic.ipynb index f43f6183..909c60b3 100644 --- a/notebooks/Hyperbolic.ipynb +++ b/notebooks/Hyperbolic.ipynb @@ -765,7 +765,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/HypercubeGraph.ipynb b/notebooks/HypercubeGraph.ipynb index e9ca5b01..3d3f5551 100644 --- a/notebooks/HypercubeGraph.ipynb +++ b/notebooks/HypercubeGraph.ipynb @@ -711,7 +711,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/Hypersphere.ipynb b/notebooks/Hypersphere.ipynb index 29595c95..bd4272e3 100644 --- a/notebooks/Hypersphere.ipynb +++ b/notebooks/Hypersphere.ipynb @@ -734,7 +734,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/Mesh.ipynb b/notebooks/Mesh.ipynb index 05ae3de0..eb116b4f 100644 --- a/notebooks/Mesh.ipynb +++ b/notebooks/Mesh.ipynb @@ -808,7 +808,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/SPD.ipynb b/notebooks/SPD.ipynb index c05a53aa..16cf33aa 100644 --- a/notebooks/SPD.ipynb +++ b/notebooks/SPD.ipynb @@ -597,7 +597,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/SpecialOrthogonal.ipynb b/notebooks/SpecialOrthogonal.ipynb index 328fc289..4468faeb 100644 --- a/notebooks/SpecialOrthogonal.ipynb +++ b/notebooks/SpecialOrthogonal.ipynb @@ -817,7 +817,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/SpecialUnitary.ipynb b/notebooks/SpecialUnitary.ipynb index 1162a6cd..98d963b4 100644 --- a/notebooks/SpecialUnitary.ipynb +++ b/notebooks/SpecialUnitary.ipynb @@ -875,7 +875,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/Torus.ipynb b/notebooks/Torus.ipynb index 0cee708b..06912612 100644 --- a/notebooks/Torus.ipynb +++ b/notebooks/Torus.ipynb @@ -1157,7 +1157,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/backends/JAX_Graph.ipynb b/notebooks/backends/JAX_Graph.ipynb index ebf7a7dc..d96e67ee 100644 --- a/notebooks/backends/JAX_Graph.ipynb +++ b/notebooks/backends/JAX_Graph.ipynb @@ -860,7 +860,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/backends/PyTorch_Graph.ipynb b/notebooks/backends/PyTorch_Graph.ipynb index 0bd13335..2de00258 100644 --- a/notebooks/backends/PyTorch_Graph.ipynb +++ b/notebooks/backends/PyTorch_Graph.ipynb @@ -860,7 +860,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/backends/TensorFlow_Graph.ipynb b/notebooks/backends/TensorFlow_Graph.ipynb index fcc7d08f..c45e2ba6 100644 --- a/notebooks/backends/TensorFlow_Graph.ipynb +++ b/notebooks/backends/TensorFlow_Graph.ipynb @@ -862,7 +862,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/frontends/GPJax.ipynb b/notebooks/frontends/GPJax.ipynb index 96ddcf08..a403bdb3 100644 --- a/notebooks/frontends/GPJax.ipynb +++ b/notebooks/frontends/GPJax.ipynb @@ -2058,7 +2058,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/frontends/GPflow.ipynb b/notebooks/frontends/GPflow.ipynb index a79e90ff..4249b4d0 100644 --- a/notebooks/frontends/GPflow.ipynb +++ b/notebooks/frontends/GPflow.ipynb @@ -535,7 +535,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/frontends/GPyTorch.ipynb b/notebooks/frontends/GPyTorch.ipynb index 16bfd4e6..0e9c6d52 100644 --- a/notebooks/frontends/GPyTorch.ipynb +++ b/notebooks/frontends/GPyTorch.ipynb @@ -617,7 +617,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/other/Bayesian Optimization.ipynb b/notebooks/other/Bayesian Optimization.ipynb index 94893e9b..1616f19e 100644 --- a/notebooks/other/Bayesian Optimization.ipynb +++ b/notebooks/other/Bayesian Optimization.ipynb @@ -769,7 +769,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/other/HammingGraphTiming.ipynb b/notebooks/other/HammingGraphTiming.ipynb index 83b0c1a8..3f5e05a8 100644 --- a/notebooks/other/HammingGraphTiming.ipynb +++ b/notebooks/other/HammingGraphTiming.ipynb @@ -192,7 +192,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/other/Hyperbolic Approximations.ipynb b/notebooks/other/Hyperbolic Approximations.ipynb index dfac285c..b4528824 100644 --- a/notebooks/other/Hyperbolic Approximations.ipynb +++ b/notebooks/other/Hyperbolic Approximations.ipynb @@ -652,7 +652,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", diff --git a/notebooks/other/SPD Approximations.ipynb b/notebooks/other/SPD Approximations.ipynb index e5447b22..02295fc1 100644 --- a/notebooks/other/SPD Approximations.ipynb +++ b/notebooks/other/SPD Approximations.ipynb @@ -523,7 +523,7 @@ "```\n", "@article{JMLR:v26:24-1185,\n", " author = {Peter Mostowsky and Vincent Dutordoir and Iskander Azangulov and No{\\'e}mie Jaquier and Michael John Hutchinson and Aditya Ravuri and Leonel Rozo and Alexander Terenin and Viacheslav Borovitskiy},\n", - " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds,\n\", Meshes,\n\", and Graphs},\n", + " title = {The GeometricKernels Package: Heat and Mat{\\'e}rn Kernels for Geometric Learning on Manifolds, Meshes, and Graphs},\n", " journal = {Journal of Machine Learning Research},\n", " year = {2025},\n", " volume = {26},\n", From 7b2527253bc35815c456280676b58a73bb086a2e Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 01:55:52 +0300 Subject: [PATCH 6/9] Update CHANGELOG.md --- CHANGELOG.md | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index d6fe23d0..58c4c3da 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,8 +4,13 @@ Stable release! The package is deemed stable which is corroborated by the fact the -package paper was [published](https://jmlr.org/papers/v26/24-1185.html) in JMLR! -Please consider citing us if you use this package. +package paper was [published](https://jmlr.org/papers/v26/24-1185.html) in JMLR! +Please consider citing us if you use the library. + +Besides, there are some maintenance updates: +* Constrain versions of dependendencies due to external incompatibilities by + @stoprightthere in + https://github.com/geometric-kernels/GeometricKernels/pull/174 and https://github.com/geometric-kernels/GeometricKernels/pull/175 ## v0.4.2 - 11.02.2026 Maintance release (https://github.com/geometric-kernels/GeometricKernels/pull/173). From fc423891a19e06eeb5d549baacc0bdc5f68de94d Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 01:59:35 +0300 Subject: [PATCH 7/9] Fix version --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 58c4c3da..b35964aa 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,6 +1,6 @@ # CHANGELOG -## v0.0.1 - 11.03.2026 +## v1.0.0 - 11.03.2026 Stable release! The package is deemed stable which is corroborated by the fact the From 3a7bfc97c5ce53ff4254ef0040f4094e85a76869 Mon Sep 17 00:00:00 2001 From: Viacheslav Borovitskiy Date: Tue, 10 Mar 2026 09:22:34 +0000 Subject: [PATCH 8/9] Change year and journal information in CITATION.cff Signed-off-by: Viacheslav Borovitskiy --- CITATION.cff | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index 16febcf9..10bf65d1 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -25,5 +25,10 @@ preferred-citation: given-names: "Alexander" - family-names: "Borovitskiy" given-names: "Viacheslav" - year: "2024" - journal: "arXiv:2407.08086" \ No newline at end of file + year: "2025" + journal: "Journal of Machine Learning Research" + volume: "26" + issue: "276" + start: 1 + end: 14 + url: "http://jmlr.org/papers/v26/24-1185.html" From a5ef8bcc0e635c49bb19a384b2fe840a254063e8 Mon Sep 17 00:00:00 2001 From: stoprightthere Date: Tue, 10 Mar 2026 23:30:34 +0300 Subject: [PATCH 9/9] Update CHANGELOG.md Signed-off-by: stoprightthere --- CHANGELOG.md | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index b35964aa..c83b7570 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,10 +1,9 @@ # CHANGELOG -## v1.0.0 - 11.03.2026 +## v1.0.0 - 10.03.2026 Stable release! -The package is deemed stable which is corroborated by the fact the -package paper was [published](https://jmlr.org/papers/v26/24-1185.html) in JMLR! +The package is now deemed stable which is supported by the [publication](https://jmlr.org/papers/v26/24-1185.html) of our paper in JMLR! Please consider citing us if you use the library. Besides, there are some maintenance updates: