setup.py

# pybio, https://github.com/grexor/pybio

from setuptools import setup
from setuptools import find_packages

with open("README.md", "r") as fh:
    long_desc = fh.read()
    long_desc = "\n".join(long_desc.split("\n")[1:])

setup(
    name='pybio',
    license="GNU General Public License v3.0",
    version = open("pybio/version", "rt").readlines()[0].replace("\n", "").replace("\r", ""),
    packages=find_packages(),
    description='pybio genomics',
    long_description = long_desc,
    long_description_content_type = "text/markdown",
    classifiers=[
        'Programming Language :: Python :: 3',
        'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',
    ],    
    zip_safe=False,
    author='Gregor Rot',
    #scripts=["pybio/pybio"],
    entry_points={
        'console_scripts': ['pybio=pybio:main']
    },
    author_email='gregor.rot@gmail.com',
    url='https://github.com/grexor/pybio',
    keywords=['pybio', 'bioinformatics'],
    include_package_data=True,
    package_data={
        'pybio': ['pybio.config.example', 'version'],
    },
    install_requires=["pysam", "numpy", "psutil", "bs4", "requests"],
)