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DESCRIPTION
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Package: SCDC
Title: Bulk RNA-seq deconvolution by scRNA-seq with multi-reference datasets
Version: 0.0.0.9000
Authors@R:
person(given = "Meichen",
family = "Dong",
role = c("aut", "cre"),
email = "meichen@live.unc.edu")
Description: SCDC adopts an ENSEMBLE method to integrate deconvolution results from different scRNA-seq datasets that are produced in different laboratories and at different times, implicitly addressing the batch-effect confounding.
License: What license it uses
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
URL: https://github.com/meichendong/SCDC
BugReports: https://github.com/meichendong/SCDC/issues
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr
Imports:
Rcpp (>= 0.11.0),
L1pack,
Biobase,
nnls,
reshape,
xbioc,
cowplot,
ggplot2,
pheatmap
Remotes:
renozao/xbioc
biocViews:
LinkingTo: Rcpp
Depends: R (>= 3.0.1)