config.ini.example

[exclude]
# ignore_sam_codes specifies a comma separated list of sam_codes to 
# completely remove from the output summary
ignore_sam_codes = 2016,2017

[study_subsets]
# study subsets are a way to break up the output by specific sam_codes
# if a sam_code is not listed here for a study, the sample will be put 
# under 'all_relevant'
# 'target_time' is target processing time in minutes
#
# format:
# n.b. the subsets data is specified as a json object
# short_code = {
#     "subset_1": {
#        "sam_codes": ["sam_code_1", "sam_code_2", ...],
#        "target_time": 90
#     "subset_2": ...
#   }
SHORTCODE = {
    "serum": {
      "sam_codes": ["2020"],
      "target_time": 90
    },
    "saliva": {
      "sam_codes": ["2021","2022"],
      "target_time": 120
    }
  }
  
[studies]
# define default settings for a study (by short_code)
# data is specified as json object
# currently supports "target_time" (mins)
SHORTCODE = {
    "target_time": "90"
  }