run.sh has root-only permissions

[aeszter]

After following the instructions, /opt/alphafold/run.sh is root:root 750, so it cannot be run by ordinary users.
Maybe this is a umask problem? I use 027, but I would expect this to be ignored by anything that resembles a build system (where permissions are usually explicitly defined, so a umask doesn't make much sense).

[hyoo]

well, in my build, /opt/alphafold/run.sh is 755

Singularity> ls -al /opt/alphafold/
total 79
drwxrwxr-x. 8 root root   297 Jan 22 01:27 .
drwxr-xr-x. 9 root root   237 Jan 22 01:27 ..
-rw-rw-r--. 1 root root    32 Jan 22 01:24 .dockerignore
drwxrwxr-x. 8 root root   184 Jan 22 01:24 .git
-rw-rw-r--. 1 root root   973 Jan 22 01:24 CONTRIBUTING.md
-rw-rw-r--. 1 root root 11358 Jan 22 01:24 LICENSE
-rw-rw-r--. 1 root root 28678 Jan 22 01:24 README.md
drwxrwxr-x. 7 root root   103 Jan 22 01:24 alphafold
drwxrwxr-x. 2 root root    98 Jan 22 01:24 docker
drwxrwxr-x. 2 root root    63 Jan 22 01:24 imgs
drwxrwxr-x. 2 root root    38 Jan 22 01:24 notebooks
-rw-rw-r--. 1 root root   207 Jan 22 01:24 requirements.txt
-rwxr-xr-x. 1 root root  4613 Jan 22 01:16 run.sh
-rw-rw-r--. 1 root root 17927 Jan 22 01:24 run_alphafold.py
-rw-rw-r--. 1 root root  3381 Jan 22 01:24 run_alphafold_test.py
drwxrwxr-x. 2 root root   326 Jan 22 01:24 scripts
-rw-rw-r--. 1 root root  1999 Jan 22 01:24 setup.py