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docs/Condition.md

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# Class: Condition
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URI: [include:Condition](https://w3id.org/include/Condition)
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```mermaid
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classDiagram
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class Condition
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Condition : age_at_condition_observation
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Condition : condition_data_source
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Condition : condition_interpretation
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Condition : has_participant
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Condition : hpo_code
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Condition : hpo_label
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Condition : maxo_code
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Condition : maxo_label
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Condition : mondo_code
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Condition : mondo_label
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Condition : other_code
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Condition : other_label
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```
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<!-- no inheritance hierarchy -->
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## Slots
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| Name | Cardinality and Range | Description |
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| --- | --- | --- |
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| [has_participant](has_participant.md) | 0..1 <br/> [Participant](Participant.md) | Link to a Participant |
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| [age_at_condition_observation](age_at_condition_observation.md) | 0..1 <br/> [xsd:string](xsd:string) | Age in days at which condition was observed, recorded, or diagnosed |
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| [mondo_label](mondo_label.md) | 0..1 <br/> [xsd:string](xsd:string) | Label for condition in the Mondo Disease Ontology (MONDO) |
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| [mondo_code](mondo_code.md) | 0..1 <br/> [xsd:string](xsd:string) | Code for condition in the Mondo Disease Ontology (MONDO) |
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| [condition_interpretation](condition_interpretation.md) | 0..1 <br/> [EnumConditionInterpretation](EnumConditionInterpretation.md) | Whether condition was observed or not |
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| [condition_data_source](condition_data_source.md) | 0..1 <br/> [EnumConditionDataSource](EnumConditionDataSource.md) | Whether condition information was obtained from medical records (Clinical) or... |
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| [hpo_label](hpo_label.md) | 0..1 <br/> [xsd:string](xsd:string) | Label for condition in the Human Phenotype Ontology (HPO) |
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| [hpo_code](hpo_code.md) | 0..1 <br/> [xsd:string](xsd:string) | Code for condition in the Human Phenotype Ontology (HPO) |
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| [maxo_label](maxo_label.md) | 0..1 <br/> [xsd:string](xsd:string) | Label for condition in the Medical Action Ontology (MAXO) |
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| [maxo_code](maxo_code.md) | 0..1 <br/> [xsd:string](xsd:string) | Code for condition in the Medical Action Ontology (MAXO) |
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| [other_label](other_label.md) | 0..1 <br/> [xsd:string](xsd:string) | Label for condition in another ontology (if no match in HPO, MONDO, or MAXO) |
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| [other_code](other_code.md) | 0..1 <br/> [xsd:string](xsd:string) | Code for condition in another ontology (if no match in HPO, MONDO, or MAXO) |
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## Usages
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## Identifier and Mapping Information
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### Schema Source
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* from schema: https://w3id.org/include
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## Mappings
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| Mapping Type | Mapped Value |
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| --- | --- |
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| self | ['include:Condition'] |
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| native | ['include:Condition'] |
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## LinkML Specification
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<!-- TODO: investigate https://stackoverflow.com/questions/37606292/how-to-create-tabbed-code-blocks-in-mkdocs-or-sphinx -->
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### Direct
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<details>
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```yaml
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name: Condition
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from_schema: https://w3id.org/include
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rank: 1000
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slots:
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- has_participant
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- age_at_condition_observation
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- mondo_label
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- mondo_code
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- condition_interpretation
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- condition_data_source
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- hpo_label
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- hpo_code
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- maxo_label
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- maxo_code
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- other_label
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- other_code
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```
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</details>
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### Induced
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<details>
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```yaml
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name: Condition
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from_schema: https://w3id.org/include
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rank: 1000
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attributes:
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has_participant:
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name: has_participant
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definition_uri: include:has_participant
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description: Link to a Participant
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from_schema: https://w3id.org/include
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rank: 1000
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alias: has_participant
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owner: Condition
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domain_of:
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- Biospecimen
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- DataFile
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- Condition
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- Biospecimen
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- DataFile
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- FamilyGroup
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- Condition
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range: Participant
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age_at_condition_observation:
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name: age_at_condition_observation
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definition_uri: include:age_at_condition_observation
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description: Age in days at which condition was observed, recorded, or diagnosed
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from_schema: https://w3id.org/include
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rank: 1000
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alias: age_at_condition_observation
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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mondo_label:
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name: mondo_label
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definition_uri: include:mondo_label
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description: Label for condition in the Mondo Disease Ontology (MONDO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: mondo_label
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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mondo_code:
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name: mondo_code
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definition_uri: include:mondo_code
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description: Code for condition in the Mondo Disease Ontology (MONDO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: mondo_code
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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condition_interpretation:
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name: condition_interpretation
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definition_uri: include:condition_interpretation
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description: Whether condition was observed or not. "Not Observed" indicates participant
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was specifically examined for that condition, or health record specifically
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queried for that condition, and found to be negative. Sept. 2022 release will
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only include positive assertions.
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from_schema: https://w3id.org/include
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rank: 1000
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alias: condition_interpretation
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: enum_condition_interpretation
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condition_data_source:
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name: condition_data_source
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definition_uri: include:condition_data_source
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description: Whether condition information was obtained from medical records (Clinical)
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or patient survey (Self-Reported)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: condition_data_source
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: enum_condition_data_source
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hpo_label:
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name: hpo_label
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definition_uri: include:hpo_label
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description: Label for condition in the Human Phenotype Ontology (HPO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: hpo_label
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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hpo_code:
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name: hpo_code
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definition_uri: include:hpo_code
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description: Code for condition in the Human Phenotype Ontology (HPO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: hpo_code
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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maxo_label:
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name: maxo_label
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definition_uri: include:maxo_label
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description: Label for condition in the Medical Action Ontology (MAXO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: maxo_label
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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maxo_code:
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name: maxo_code
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definition_uri: include:maxo_code
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description: Code for condition in the Medical Action Ontology (MAXO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: maxo_code
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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other_label:
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name: other_label
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definition_uri: include:other_label
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description: Label for condition in another ontology (if no match in HPO, MONDO,
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or MAXO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: other_label
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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other_code:
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name: other_code
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definition_uri: include:other_code
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description: Code for condition in another ontology (if no match in HPO, MONDO,
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or MAXO)
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from_schema: https://w3id.org/include
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rank: 1000
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alias: other_code
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owner: Condition
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domain_of:
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- Condition
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- Condition
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range: string
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```
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</details>

docs/EnumConditionDataSource.md

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# EnumConditionDataSource
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None
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URI: EnumConditionDataSource
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## Permissible Values
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| Value | Meaning | Description | Info |
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| --- | --- | --- | --- |
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| clinical | None | | |
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| self_reported | None | | |
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## Identifier and Mapping Information
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### Schema Source
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* from schema: https://w3id.org/include
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# EnumConditionInterpretation
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None
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URI: EnumConditionInterpretation
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## Permissible Values
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| Value | Meaning | Description | Info |
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| --- | --- | --- | --- |
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| observed | None | | |
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| not_observed | None | | |
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## Identifier and Mapping Information
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### Schema Source
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* from schema: https://w3id.org/include
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# Slot: age_at_condition_observation
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_Age in days at which condition was observed, recorded, or diagnosed_
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URI: [https://w3id.org/include/age_at_condition_observation](https://w3id.org/include/age_at_condition_observation)
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<!-- no inheritance hierarchy -->
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## Properties
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* Range: [xsd:string](xsd:string)
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## Identifier and Mapping Information
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### Schema Source
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* from schema: https://w3id.org/include
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