- when selecting disease name from list - would be nice if we could select by numbered position on list rather than having to write out the whole condition name - any typo and goes straight back to beginning.
- documentation - needs major rework.
- You have chosen cystic renal disease GRch37 build selected. Traceback (most recent call last): File "/app/PanelSearch/main.py", line 213, in main() File "/app/PanelSearch/main.py", line 127, in main panel_data = panelapp_search_parse(RESPONSE.json(), SEARCH.genome_build) File "/app/PanelSearch/PanelApp_Request_Parse.py", line 97, in panelapp_search_parse OUTPUT = vv_request_parse(VV_RESP.json(), OUTPUT) File "/app/PanelSearch/VV_Request_Parse.py", line 14, in vv_request_parse genome_direction = list(vv_gene_record['transcripts'][0]['genomic_spans'].values())[0]['orientation'] IndexError: list index out of range from vv request parse try: transcript = vv_gene_record['transcripts'][0]['reference'] # if the gene record has no transcript, this line can IndexError
- have actual transcript instead of placeholder.
- follow pylint suggestions
- error when choose not to generate bed file