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modules.json
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146 lines (146 loc) · 6.41 KB
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{
"name": "nf-core/methylong",
"homePage": "https://github.com/nf-core/methylong",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"clair3": {
"branch": "master",
"git_sha": "ce30f336d78afcc8a90ade385eda62848d8c15f3",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"fibertoolsrs/addnucleosomes": {
"branch": "master",
"git_sha": "b29fd980347bbb0c0d6abb332c83a2be114b4b89",
"installed_by": ["modules"]
},
"fibertoolsrs/extract": {
"branch": "master",
"git_sha": "b29fd980347bbb0c0d6abb332c83a2be114b4b89",
"installed_by": ["modules"]
},
"fibertoolsrs/predictm6a": {
"branch": "master",
"git_sha": "b29fd980347bbb0c0d6abb332c83a2be114b4b89",
"installed_by": ["modules"]
},
"gawk": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"gunzip": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"minimap2/align": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"modkit/callmods": {
"branch": "master",
"git_sha": "f274c188ef81409164a74178d15ee3359eeb39d7",
"installed_by": ["modules"]
},
"modkit/pileup": {
"branch": "master",
"git_sha": "208c242320433d6d32ea7bf5212ee9577c6baa3d",
"installed_by": ["modules"]
},
"modkit/repair": {
"branch": "master",
"git_sha": "f274c188ef81409164a74178d15ee3359eeb39d7",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "af27af1be706e6a2bb8fe454175b0cdf77f47b49",
"installed_by": ["modules"]
},
"pbjasmine": {
"branch": "master",
"git_sha": "5e00a5b1453f6ca5e64a3c8034d74e24bc03ef7e",
"installed_by": ["modules"]
},
"pbmm2/align": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"pigz/compress": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"porechop/porechop": {
"branch": "master",
"git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
"installed_by": ["modules"]
},
"samtools/faidx": {
"branch": "master",
"git_sha": "c8be52dba1166c678e74cda9c3a3c221635c8bb1",
"installed_by": ["modules"]
},
"samtools/fastq": {
"branch": "master",
"git_sha": "c8be52dba1166c678e74cda9c3a3c221635c8bb1",
"installed_by": ["modules"]
},
"samtools/flagstat": {
"branch": "master",
"git_sha": "e334e12a1e985adc5ffc3fc78a68be1de711de45",
"installed_by": ["modules"]
},
"samtools/import": {
"branch": "master",
"git_sha": "c8be52dba1166c678e74cda9c3a3c221635c8bb1",
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "c8be52dba1166c678e74cda9c3a3c221635c8bb1",
"installed_by": ["modules"]
},
"samtools/sort": {
"branch": "master",
"git_sha": "c8be52dba1166c678e74cda9c3a3c221635c8bb1",
"installed_by": ["modules"]
},
"tabix/bgziptabix": {
"branch": "master",
"git_sha": "f2cfcf9d3f6a2d123e6c44aefa788aa232204a7a",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "271e7fc14eb1320364416d996fb077421f3faed2",
"installed_by": ["subworkflows"]
},
"utils_nfschema_plugin": {
"branch": "master",
"git_sha": "4b406a74dc0449c0401ed87d5bfff4252fd277fd",
"installed_by": ["subworkflows"]
}
}
}
}
}
}