MixedModelsTutorials.toc

\contentsline {chapter}{\numberline {1}Introduction}{5}{chapter.1}
\contentsline {chapter}{\numberline {2}Video 3: Relating two-stage random effects to simulated data and model output}{7}{chapter.2}
\contentsline {section}{\numberline {2.1}Introduction}{7}{section.2.1}
\contentsline {section}{\numberline {2.2}Data simulation}{7}{section.2.2}
\contentsline {subsubsection}{\numberline {2.2.0.1}Review of the two-stage formulation}{8}{subsubsection.2.2.0.1}
\contentsline {subsubsection}{\numberline {2.2.0.2}Data simulation based on two-stage formulation}{8}{subsubsection.2.2.0.2}
\contentsline {section}{\numberline {2.3}Generate and plot data}{10}{section.2.3}
\contentsline {section}{\numberline {2.4}Run model and compare to simulation settings}{11}{section.2.4}
\contentsline {section}{\numberline {2.5}Omitting random effects can inflate Type I error}{12}{section.2.5}
\contentsline {section}{\numberline {2.6}Summary}{13}{section.2.6}
\contentsline {chapter}{\numberline {3}Video 4: The Two-stage temptation: Why don''t we just use the summary statistics approach??}{15}{chapter.3}
\contentsline {section}{\numberline {3.1}Introduction}{15}{section.3.1}
\contentsline {paragraph}{\numberline {3.1.0.0.1}Regularization: key difference}{16}{paragraph.3.1.0.0.1}
\contentsline {paragraph}{\numberline {3.1.0.0.2}What is a conditional mode?}{17}{paragraph.3.1.0.0.2}
\contentsline {subsection}{\numberline {3.1.1}Simulated data}{17}{subsection.3.1.1}
\contentsline {subsection}{\numberline {3.1.2}2-stage summary statistics approach compared to predicted subject effects from lmer}{19}{subsection.3.1.2}
\contentsline {subsection}{\numberline {3.1.3}OLS versus conditional modes}{20}{subsection.3.1.3}
\contentsline {subsection}{\numberline {3.1.4}Summary and what's next}{21}{subsection.3.1.4}