NeuroPy/environment.yml at main · kimqi/NeuroPy · GitHub

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name: NeuroPy
channels:
    - conda-forge
dependencies:
    - python=3.9
    - numpy=1.20.2
    - scipy=1.6.2
    - matplotlib
    - pandas
    - joblib
    - scikit-learn
    - hmmlearn
    - ipywidgets
    - seaborn
    - h5py
    - opencv
    - pytables
    - tqdm
    - xarray=0.16.2
    - zarr
    - scikit-image
    - notebook
    # May need to install pingouin via pip after the fact
    - pingouin
    # May need to install libgcc for linux distributions
    - libgcc
    # These modules are for importing DeepLabCut data, comment out if you don't need.
    # - easydict
    # - ruamel.yaml
    # - cupy  # uncomment this if you want to run correlograms with a GPU using the ccg_gpu.py module.

    # Works well in RedHat8. Note you may have to comment out the following lines and then install manually "pip install scikit-posthocs" in
Windows.
    # - pip:
    #  - scikit-posthocs