From 31449a93650aa69dfece1f2d5b77aceeb662b31e Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 4 May 2026 18:25:51 +0000
Subject: [PATCH] [pre-commit.ci] pre-commit autoupdate
MIME-Version: 1.0
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Content-Transfer-Encoding: 8bit

updates:
- [github.com/pre-commit/pre-commit-hooks: v5.0.0 → v6.0.0](https://github.com/pre-commit/pre-commit-hooks/compare/v5.0.0...v6.0.0)
- [github.com/PyCQA/flake8: 7.1.1 → 7.3.0](https://github.com/PyCQA/flake8/compare/7.1.1...7.3.0)
- [github.com/PyCQA/isort: 5.13.2 → 9.0.0a3](https://github.com/PyCQA/isort/compare/5.13.2...9.0.0a3)
- [github.com/asottile/pyupgrade: v3.19.1 → v3.21.2](https://github.com/asottile/pyupgrade/compare/v3.19.1...v3.21.2)
- [github.com/snakemake/snakefmt: v0.11.4 → v1.1.0](https://github.com/snakemake/snakefmt/compare/v0.11.4...v1.1.0)
---
 .pre-commit-config.yaml | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index b5ec1f1..93cb5b8 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -3,7 +3,7 @@
 # See https://pre-commit.com/hooks.html for more hooks
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v5.0.0
+    rev: v6.0.0
     hooks:
       - id: trailing-whitespace
       - id: end-of-file-fixer
@@ -16,25 +16,25 @@ repos:
       - id: mixed-line-ending
 
   - repo: https://github.com/PyCQA/flake8
-    rev: 7.1.1
+    rev: 7.3.0
     hooks:
       - id: flake8
         args: ['--config=.flake8']
 
   - repo: https://github.com/PyCQA/isort
-    rev: 5.13.2
+    rev: 9.0.0a3
     hooks:
       - id: isort
         args: ['--profile', 'black']
 
   - repo: https://github.com/asottile/pyupgrade
-    rev: v3.19.1
+    rev: v3.21.2
     hooks:
       - id: pyupgrade
         args: [--py39-plus]
 
   - repo: https://github.com/snakemake/snakefmt
-    rev: v0.11.4
+    rev: v1.1.0
     hooks:
       - id: snakefmt