MyoQuant/pyproject.toml at main · lambda-science/MyoQuant · GitHub

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[project]
name = "myoquant"
version = "0.4.0"
description = "MyoQuant🔬: a tool to automatically quantify pathological features in muscle fiber histology images."
authors = [{name="Corentin Meyer", email="contact@cmeyer.fr"}]
maintainers = [{name="Corentin Meyer", email="contact@cmeyer.fr"}]
license = "AGPL-3.0-or-later"
readme = "README.md"
homepage = "https://lbgi.fr/MyoQuant/"
repository = "https://github.com/lambda-science/MyoQuant"
keywords = ["histology", "quantification", "biology","deep-learning"]
requires-python = "<3.13, >=3.10"
dependencies = [
    "tensorflow>=2.19.0",
    "keras>=3.9.0",
    "cellpose<4.0.0",
    "stardist>=0.9.1",
    "numpy<2.0.0",
    "csbdeep>=0.8.1",
    "imageio>=2.37.0",
    "scikit-image>=0.25.2",
    "pandas>=2.2.3",
    "typer>=0.15.2",
    "rich>=13.9.4",
    "seaborn>=0.13.2",
    "scikit-learn>=1.6.1",
    "textual>=2.1.2",
    "streamlit>=1.44.0",
    "pyngrok>=5.2.3",
    "matplotlib>=3.9.4",
    "ipykernel>=6.29.5",
    "pillow>=11.1.0",
    "tifffile>=2025.3.13",
    "huggingface-hub>=0.32.4",
    "trogon>=0.6.0",
]

[project.scripts]
myoquant = "myoquant.__main__:app"

[tool.uv]
dev-dependencies = [
    "ruff",
    "mkdocs-material",
    "ipykernel",
    "pytest",
    "pre-commit",
    "mkdocstrings",
    "mypy",
    "tensorflow-metal>=1.2.0",
]

[project.urls]
Homepage = "https://github.com/lambda-science/MyoQuant"
Documentation = "https://github.com/lambda-science/MyoQuant/blob/main/CLI_Documentation.md"
Repository = "https://github.com/lambda-science/MyoQuant"
Issues = "https://github.com/lambda-science/MyoQuant/issues"

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.build.targets.wheel]
packages = ["src/myoquant"]