diff --git a/apps/app_etl_dlt/README.md b/apps/app_etl_dlt/README.md new file mode 100644 index 0000000..080de11 --- /dev/null +++ b/apps/app_etl_dlt/README.md @@ -0,0 +1,133 @@ +# app_etl_dlt — dlt-based ingestion jobs + +Same goal as `app_etl` (Postgres read replica → GCS Parquet → BigQuery, +cheaply and correctly), letting dlt own the boilerplate `app_etl` hand-rolled: +chunked cursor reads, streaming Parquet writes, BigQuery batch load jobs, and +incremental-cursor state tracking. + +This is a fresh app, not a rewrite of `app_etl` in place — both exist so the +approaches can be compared before deciding which one stays. + +## Design: config registry + generic runner + +One table = one `TableConfig` entry in `tables.py`. `runner.py` has exactly +two execution paths — `run_incremental` and `run_snapshot` — and dispatches +to whichever the table's `mode` says. Adding a table means adding a +`TableConfig`, not a new job file: + +```python +# tables.py +TABLES: list[TableConfig] = [ + TableConfig( + name="payments", + mode="incremental", + cadence="hourly", + cursor_column="created_at", + initial_value=datetime(2025, 1, 1, tzinfo=timezone.utc), + primary_key="id", + ), + TableConfig(name="merchants", mode="snapshot", cadence="daily"), +] +``` + +Run a table: + +```bash +uv run python -m app_etl_dlt.runner payments +``` + +`TABLES` ships **empty** — add whichever tables you're actually ingesting; +there's no fixed pair this app expects. + +`cadence` is documentation only for now: it says how the Cloud Scheduler job +invoking `runner.py ` should be set up. Nothing in code reads it — +there's no scheduler wired up yet. + +## What dlt replaces from `app_etl` + +| `app_etl` hand-rolled | dlt equivalent | +|---|---| +| `utils/pg.py` — named-cursor chunked reads into pyarrow batches | `sql_table(..., chunk_size=...)` | +| `utils/gcs.py` — streaming Parquet writer to a fixed GCS layout | `staging=dlt.destinations.filesystem(bucket_url=...)` | +| `utils/bq.py` — `WRITE_APPEND` / `WRITE_TRUNCATE` load jobs | `pipeline.run(..., write_disposition=...)` (still a free batch load job, not streaming inserts) | +| `utils/state.py` + `ops.ingestion_runs` watermark | dlt's own pipeline state, versioned in the destination, advanced only after a successful load | +| one job file per table | one `TableConfig` entry per table | + +The incremental-window correctness contract carries over unchanged: Postgres +`now()` is transaction *start* time, so a cursor column alone isn't a safe +watermark. `run_incremental` in `runner.py` keeps the same guard `app_etl` +uses — the window's upper bound trails wall clock by `safety_lag_minutes` +(default 10) instead of extracting up to `now()`. See `app_etl`'s README for +the full race-condition writeup; the reasoning is identical here. + +## jsonb/json columns + +BigQuery can't load dlt's `json` data type from Parquet files (only from +`jsonl`/`model`) — confirmed against dlt 1.28's `ensure_supported_type`, +which raises rather than silently mis-loading or dropping the column. Any +table with `jsonb`/`json` Postgres columns (e.g. `payments.risk`, +`payments.customer`) needs `has_json_columns=True` set on its `TableConfig` +— `runner.py` uses that to apply BigQuery's `autodetect_schema` hint, which +lets BigQuery infer column types straight from the Parquet file instead of +dlt pre-declaring them. Those columns land as BigQuery `STRING` (raw JSON +text, queryable via `JSON_EXTRACT`/`PARSE_JSON`), not a native `JSON` column. +Forgetting this flag fails the whole load, loudly, not silently — so it's +hard to miss when adding a new table. + +## Known gaps vs. `app_etl` (deliberate, not accidental) + +- **No per-day snapshot history.** `app_etl`'s `ingest_merchants` loads into + `merchants$YYYYMMDD` (a BigQuery partition decorator) with `WRITE_TRUNCATE`, + so every day's snapshot survives for point-in-time joins. `run_snapshot`'s + `write_disposition="replace"` only replaces the whole table each run — + idempotent per run, but no history. Closing this gap means a + `bigquery_adapter` partition hint plus a partition-scoped load call, which + re-introduces the hand-rolled BigQuery API code this app exists to avoid. + Not implemented; revisit per-table if point-in-time history turns out to + matter for a given snapshot table. +- **No queryable run log.** `app_etl` writes an explicit, append-only + `ops.ingestion_runs` row per run (`rows_loaded`, `gcs_uri`, `watermark`) for + recon and debugging before an orchestrator exists. dlt's equivalent is the + `LoadInfo` object `run_table()` returns (printed by the CLI, not persisted). + If that observability is needed, write it into a BigQuery table shaped like + `ops.ingestion_runs` — not implemented here. + +## Configuration + +`config.py` reads env vars: `GCP_PROJECT`, `GCS_BUCKET`, `BQ_DATASET_RAW` +(default `raw_litecore`), `BQ_LOCATION` (default `me-central2` — **must +match the GCS bucket's region**; BigQuery load jobs require the dataset and +the source bucket to be co-located, otherwise you'll hit a confusing +"dataset not found in location US" error even though the dataset exists), +and Postgres as four separate parts — `PG_HOST` (default `127.0.0.1`), +`PG_PORT` (default `5432`), `PG_USER`, `PG_DATABASE` — rather than one DSN +string, so switching databases (this instance hosts one per service) is a +one-line env change. `Settings.pg_dsn` assembles the SQLAlchemy DSN from +these at call time. + +No password field: this assumes Cloud SQL IAM database auth through a +locally running Cloud SQL Auth Proxy — + +```bash +cloud-sql-proxy --auto-iam-authn --port=5432 :: +``` + +`PG_USER` is your IAM identity (e.g. your `@lite.sa` email) — the proxy +handles the actual auth handshake with Cloud SQL, so nothing here ever +holds a static DB password. See `.env` for a filled-in example. + +## Status + +Working — `run_incremental` has been run end-to-end against real +infrastructure (`payment_v2.payments` in Cloud SQL → `lite-data-dev-raw` GCS +staging → `lite-data-dev.raw_litecore.payments` in BigQuery, `me-central2`), +including the `has_json_columns` path. `run_snapshot` is implemented the same +way but hasn't had a real run yet. `TABLES` currently has one entry +(`payments`) — add more as needed. + +Required IAM on the target GCP project, learned the hard way: dataset +creation alone isn't enough — you need `roles/bigquery.dataEditor` (tables, +not just datasets), `roles/bigquery.jobUser` (to actually run load jobs; +`dataEditor` doesn't include this), and `roles/storage.objectAdmin` (or at +least `objectCreator`) on the staging bucket. Missing any one of these fails +at a different, confusingly-specific step rather than up front. diff --git a/apps/app_etl_dlt/app_etl_dlt/__init__.py b/apps/app_etl_dlt/app_etl_dlt/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/apps/app_etl_dlt/app_etl_dlt/config.py b/apps/app_etl_dlt/app_etl_dlt/config.py new file mode 100644 index 0000000..1309780 --- /dev/null +++ b/apps/app_etl_dlt/app_etl_dlt/config.py @@ -0,0 +1,60 @@ +"""Environment-driven settings — one flat object, no layering. + +Same env-var contract as app_etl (single dev GCP project for now). dlt +gets what it needs (GCS staging bucket, BigQuery dataset, PG connection) +translated from these at each pipeline's call site — no dlt.toml, no +dlt-managed secrets file, one source of truth for config across both +apps. + +Postgres connection is split into PG_HOST/PORT/USER/DATABASE rather than +one PG_DSN string, so switching databases (this instance hosts one per +service: payment_v2, risk_management, ledger, ...) is a one-line env +change instead of rebuilding a DSN. No password field: this assumes +Cloud SQL IAM database auth through a locally running Cloud SQL Auth +Proxy (`cloud-sql-proxy --auto-iam-authn`) — the same passwordless +mechanism LiteCore's own services use in cloud. PG_USER is your IAM +identity (e.g. your @lite.sa email); the proxy handles the actual auth +handshake, so nothing here ever holds a DB password. +""" + +from __future__ import annotations + +import os +import urllib.parse +from dataclasses import dataclass + + +@dataclass(frozen=True) +class Settings: + gcp_project: str # GCP project id (single dev project for now) + gcs_bucket: str # dlt filesystem staging root: "bucket" or "bucket/prefix" + # if you don't have create-bucket access, point this at a + # folder in an existing bucket, e.g. "old-bucket/lite-data-platform" + bq_dataset_raw: str # landing dataset in BQ, e.g. raw_litecore + bq_location: str # must match the GCS bucket's region — BigQuery load jobs + # require the dataset and source bucket to be co-located + pg_host: str # e.g. 127.0.0.1 (Cloud SQL Auth Proxy, run separately) + pg_port: int # e.g. 5432 + pg_user: str # IAM identity authorized on the instance, e.g. you@lite.sa + pg_database: str # e.g. payment_v2, risk_management — the one thing you'll change often + + @property + def pg_dsn(self) -> str: + """SQLAlchemy-style DSN for dlt's sql_table(credentials=...). Builds + it from the parts above so callers never hand-encode the '@' in an + IAM email themselves.""" + user = urllib.parse.quote(self.pg_user, safe="") + return f"postgresql+psycopg://{user}@{self.pg_host}:{self.pg_port}/{self.pg_database}" + + @classmethod + def from_env(cls) -> Settings: + return cls( + gcp_project=os.environ["GCP_PROJECT"], + gcs_bucket=os.environ["GCS_BUCKET"], + bq_dataset_raw=os.environ.get("BQ_DATASET_RAW", "raw_litecore"), + bq_location=os.environ.get("BQ_LOCATION", "me-central2"), + pg_host=os.environ.get("PG_HOST", "127.0.0.1"), + pg_port=int(os.environ.get("PG_PORT", "5432")), + pg_user=os.environ["PG_USER"], + pg_database=os.environ["PG_DATABASE"], + ) diff --git a/apps/app_etl_dlt/app_etl_dlt/runner.py b/apps/app_etl_dlt/app_etl_dlt/runner.py new file mode 100644 index 0000000..2c7bef2 --- /dev/null +++ b/apps/app_etl_dlt/app_etl_dlt/runner.py @@ -0,0 +1,111 @@ +"""Generic ingestion runner — dispatches a TableConfig (see tables.py) to +one of two dlt pipeline shapes, incremental or snapshot. Adding a table +should never require a branch in this file; it means a new TableConfig. + +Incremental correctness contract (unchanged from app_etl's hand-rolled +version — see that app's README for the full writeup): Postgres now() is +transaction *start* time, so a cursor column alone is not a safe +watermark — a row can commit after a later run has already advanced past +its cursor value. The guard: never extract up to now(); trail the +window's upper bound by `safety_lag_minutes` instead. dlt's own +incremental state (versioned in the destination) tracks the watermark +between runs — no hand-rolled ops.ingestion_runs table. +""" + +from __future__ import annotations + +import argparse +from datetime import datetime, timedelta, timezone + +import dlt +from dlt.common.pipeline import LoadInfo +from dlt.destinations.adapters import bigquery_adapter +from dlt.extract.resource import DltResource +from dlt.sources.sql_database import sql_table + +from app_etl_dlt.config import Settings +from app_etl_dlt.tables import TABLES, TableConfig + +CHUNK_ROWS = 50_000 + + +def _pipeline(table_name: str, settings: Settings) -> dlt.Pipeline: + return dlt.pipeline( + pipeline_name=f"ingest_{table_name}", + destination=dlt.destinations.bigquery( + project_id=settings.gcp_project, location=settings.bq_location + ), + staging=dlt.destinations.filesystem(bucket_url=f"gs://{settings.gcs_bucket}"), + dataset_name=settings.bq_dataset_raw, + ) + + +def _apply_json_hint(resource: DltResource, table: TableConfig) -> DltResource: + """BigQuery can't load dlt's "json" data_type from Parquet files (only + from jsonl/model) — verified against dlt 1.28's ensure_supported_type, + which raises rather than silently mis-loading. autodetect_schema lets + BigQuery infer column types from the Parquet file itself instead of dlt + pre-declaring them, which is dlt's own documented way out. Only applied + when the table actually has json/jsonb columns, so every other table + keeps dlt's normal (more precise) type inference.""" + if table.has_json_columns: + return bigquery_adapter(resource, autodetect_schema=True) + return resource + + +def run_incremental(table: TableConfig, settings: Settings) -> LoadInfo: + end_value = datetime.now(timezone.utc) - timedelta(minutes=table.safety_lag_minutes) + resource = sql_table( + credentials=settings.pg_dsn, + table=table.name, + incremental=dlt.sources.incremental( + table.cursor_column, + initial_value=table.initial_value, + end_value=end_value, + ), + chunk_size=CHUNK_ROWS, + ) + resource = _apply_json_hint(resource, table) + return _pipeline(table.name, settings).run( + resource, + table_name=table.name, + write_disposition="append", + primary_key=table.primary_key, + loader_file_format="parquet", + ) + + +def run_snapshot(table: TableConfig, settings: Settings) -> LoadInfo: + resource = sql_table(credentials=settings.pg_dsn, table=table.name, chunk_size=CHUNK_ROWS) + resource = _apply_json_hint(resource, table) + return _pipeline(table.name, settings).run( + resource, + table_name=table.name, + write_disposition="replace", + loader_file_format="parquet", + ) + + +def run_table(table_name: str, settings: Settings | None = None) -> LoadInfo: + table = next((t for t in TABLES if t.name == table_name), None) + if table is None: + known = ", ".join(t.name for t in TABLES) or "(none configured)" + raise ValueError(f"unknown table '{table_name}'; configured tables: {known}") + + settings = settings or Settings.from_env() + if table.mode == "incremental": + return run_incremental(table, settings) + return run_snapshot(table, settings) + + +def main() -> None: + parser = argparse.ArgumentParser(description="Run one table's ingestion job.") + parser.add_argument("table", help="table name as configured in tables.py") + args = parser.parse_args() + + load_info = run_table(args.table) + print(load_info) + + +if __name__ == "__main__": + main() diff --git a/apps/app_etl_dlt/app_etl_dlt/tables.py b/apps/app_etl_dlt/app_etl_dlt/tables.py new file mode 100644 index 0000000..fb79465 --- /dev/null +++ b/apps/app_etl_dlt/app_etl_dlt/tables.py @@ -0,0 +1,62 @@ +"""Table registry — the one place per-table ingestion is configured. + +Add a table by appending one `TableConfig` here; `runner.py`'s two generic +paths (incremental / snapshot) do the rest. dlt already absorbs the +per-table plumbing (cursor chunking, parquet staging, load jobs), so the +only thing that varies table-to-table is this config — no new job file +per table. + +`cadence` is documentation only right now: it says how the Cloud Scheduler +job invoking `runner.py ` should be set up. Nothing in code reads it +yet — there's no scheduler wired up. +""" + +from __future__ import annotations + +from dataclasses import dataclass +from datetime import datetime, timezone +from typing import Literal + + +@dataclass(frozen=True) +class TableConfig: + name: str # Postgres table name; also the BigQuery destination table name + mode: Literal["incremental", "snapshot"] + cadence: str # informational only, e.g. "hourly", "daily", "*/5 * * * *" + + # incremental-only fields + cursor_column: str | None = None # e.g. "created_at" or "updated_at" + initial_value: datetime | None = None # launch date / earliest row to backfill from + primary_key: str | None = None + safety_lag_minutes: int = 10 # see runner.py's module docstring for why this exists + + # Set True if the table has jsonb/json columns. BigQuery can't load + # dlt's "json" data_type from Parquet files (only from jsonl/model) — + # this tells runner.py to apply BigQuery's autodetect_schema hint, + # which lets BigQuery infer types from the Parquet file directly instead + # of dlt pre-declaring them. Verified against dlt 1.28's actual source + # (dlt/destinations/impl/bigquery/factory.py's ensure_supported_type): + # without it, loading fails outright, not silently. + has_json_columns: bool = False + + def __post_init__(self) -> None: + if self.mode == "incremental" and (self.cursor_column is None or self.initial_value is None): + raise ValueError(f"{self.name}: incremental tables need cursor_column and initial_value") + + +# One entry per ingested table. Empty by default — add your own. +TABLES: list[TableConfig] = [ + TableConfig( + name="payments", + mode="incremental", + cadence="hourly", + cursor_column="created_at", + # earliest row currently in payment_v2.payments is 2026-05-06; + # start a little before that so a first run backfills everything. + initial_value=datetime(2026, 5, 1, tzinfo=timezone.utc), + primary_key="id", + # risk, customer, order_data, device, threeds_input, threeds_result, + # return_url, metadata, routing_result, risk_result are all jsonb. + has_json_columns=True, + ), +] diff --git a/apps/app_etl_dlt/pyproject.toml b/apps/app_etl_dlt/pyproject.toml new file mode 100644 index 0000000..e2bc77e --- /dev/null +++ b/apps/app_etl_dlt/pyproject.toml @@ -0,0 +1,24 @@ +[project] +name = "app-etl-dlt" +version = "0.1.0" +description = "dlt-based ingestion jobs: Postgres read replica -> GCS (Parquet staging) -> BigQuery." +requires-python = ">=3.14" +# Extras verified against dlt 1.28.0's PyPI metadata: "sql-database" (hyphen, +# not underscore) for the sql_database source, "gs" for GCS filesystem +# staging ("filesystem" alone pulls s3fs/botocore, not gcsfs). Deliberately +# omitting the "postgres" extra — it pulls psycopg2-binary, which would sit +# alongside the psycopg (v3) driver app_etl already uses; psycopg[binary] +# below covers the driver instead, via the "postgresql+psycopg://" DSN +# scheme (SQLAlchemy 2.0's native psycopg3 dialect). +dependencies = [ + "dlt[bigquery,gs,sql-database]>=1.4", + "sqlalchemy>=2", + "psycopg[binary]>=3.2", +] + +[build-system] +requires = ["hatchling"] +build-backend = "hatchling.build" + +[tool.hatch.build.targets.wheel] +packages = ["app_etl_dlt"] diff --git a/apps/app_etl_dlt/tests/test_scaffold.py b/apps/app_etl_dlt/tests/test_scaffold.py new file mode 100644 index 0000000..1d03b28 --- /dev/null +++ b/apps/app_etl_dlt/tests/test_scaffold.py @@ -0,0 +1,87 @@ +"""Scaffold sanity: every module imports, and the settings/table-registry +contracts hold.""" + +from datetime import datetime, timezone + +import pytest + + +def test_modules_import(): + import app_etl_dlt.config + import app_etl_dlt.runner + import app_etl_dlt.tables # noqa: F401 + + +def test_settings_from_env(monkeypatch): + monkeypatch.setenv("GCP_PROJECT", "lite-data-dev") + monkeypatch.setenv("GCS_BUCKET", "lite-data-raw-dev") + monkeypatch.setenv("PG_USER", "u@lite.sa") + monkeypatch.setenv("PG_DATABASE", "litecore") + + from app_etl_dlt.config import Settings + + s = Settings.from_env() + assert s.gcp_project == "lite-data-dev" + assert s.bq_dataset_raw == "raw_litecore" # default + assert s.bq_location == "me-central2" # default + assert s.pg_host == "127.0.0.1" # default + assert s.pg_port == 5432 # default + + +def test_settings_requires_project(monkeypatch): + monkeypatch.delenv("GCP_PROJECT", raising=False) + monkeypatch.setenv("GCS_BUCKET", "b") + monkeypatch.setenv("PG_USER", "u@lite.sa") + monkeypatch.setenv("PG_DATABASE", "d") + + from app_etl_dlt.config import Settings + + with pytest.raises(KeyError): + Settings.from_env() + + +def test_pg_dsn_url_encodes_at_sign_in_user(monkeypatch): + monkeypatch.setenv("GCP_PROJECT", "lite-data-dev") + monkeypatch.setenv("GCS_BUCKET", "b") + monkeypatch.setenv("PG_USER", "a.farooq@lite.sa") + monkeypatch.setenv("PG_DATABASE", "payment_v2") + + from app_etl_dlt.config import Settings + + s = Settings.from_env() + assert s.pg_dsn == "postgresql+psycopg://a.farooq%40lite.sa@127.0.0.1:5432/payment_v2" + + +def test_table_config_requires_cursor_for_incremental(): + from app_etl_dlt.tables import TableConfig + + with pytest.raises(ValueError): + TableConfig(name="bad", mode="incremental", cadence="hourly") + + +def test_table_config_snapshot_needs_no_cursor(): + from app_etl_dlt.tables import TableConfig + + # Should not raise: snapshot mode has no incremental fields to validate. + TableConfig(name="fine", mode="snapshot", cadence="daily") + + +def test_run_table_rejects_unknown_name(): + from app_etl_dlt.runner import run_table + + with pytest.raises(ValueError, match="unknown table"): + run_table("does_not_exist") + + +def test_table_config_accepts_incremental_fields(): + from app_etl_dlt.tables import TableConfig + + t = TableConfig( + name="payments", + mode="incremental", + cadence="hourly", + cursor_column="created_at", + initial_value=datetime(2025, 1, 1, tzinfo=timezone.utc), + primary_key="id", + ) + assert t.cursor_column == "created_at" diff --git a/pyproject.toml b/pyproject.toml index dd2f34c..b2d4a01 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -5,6 +5,7 @@ description = "Lite data platform monorepo — ingestion, transformation, and an requires-python = ">=3.14" dependencies = [ "app-etl", + "app-etl-dlt", ] # uv workspace: every app under apps/ is a workspace member sharing one venv @@ -15,6 +16,7 @@ members = ["apps/*"] [tool.uv.sources] app-etl = { workspace = true } +app-etl-dlt = { workspace = true } [dependency-groups] dev = [ @@ -22,6 +24,14 @@ dev = [ "ruff>=0.5", ] +# Every app's tests/ dir has no __init__.py, so pytest's default import mode +# derives each test module's name from its filename alone. Two apps both +# named a file tests/test_scaffold.py collide under that scheme (pytest +# error: "import file mismatch"). importlib mode identifies modules by +# their file path instead, so same-named test files across apps don't clash. +[tool.pytest.ini_options] +addopts = "--import-mode=importlib" + # The root is a workspace aggregator, not a distributable package. 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