diff --git a/docs/amin1/intro.ipynb b/docs/amin1/intro.ipynb index 3fd3af4..ec57218 100644 --- a/docs/amin1/intro.ipynb +++ b/docs/amin1/intro.ipynb @@ -6,11 +6,17 @@ "id": "LBNBl2exUYWu" }, "source": [ - "# Amin1.0\n", + "# Amin1.0 (Vector Observatory - Asia Project _Anopheles minimus_ Phase 1 Data Release)\n", "\n", - "The `Amin1.0` resource comprises data from whole-genome sequencing of *Anopheles minimus* mosquitoes, which are a major vector of malaria in Southeast Asia. The mosquitoes were collected from sites in Cambodia in the context of a study of malaria vector species diversity led by Brandy St. Laurent.\n", + "The **[Amin1.0](intro): _Anopheles minimus_ data resource** resource comprises data from whole-genome sequencing of *Anopheles minimus* mosquitoes, which are a major vector of malaria in Southeast Asia. The mosquitoes were collected from sites in Cambodia in the context of a study of malaria vector species diversity led by Brandy St. Laurent. These data were generated as part of the [MalariaGEN Vector Observatory Asian Vector Genomic Surveillance Project](https://www.malariagen.net/project/vector-observatory-asia/)\n", "\n", - "This page provides an introduction to the `Amin1.0` data, which we hope will be a valuable resource for research and surveillance of malaria vectors in Southeast Asia. If you have any questions about this guide or how to use the data, please [start a new discussion](https://github.com/malariagen/vector-public-data/discussions/new) on the malariagen/vector-open-data repo on GitHub. If you find any bugs, please [raise an issue](https://github.com/malariagen/vector-public-data/issues/new/choose)." + "Vector Observatory - Asia connects research groups that are investigating the population structure and diversity of malaria vectors in Asia. This centres on multiple vectors from the Greater Mekong Subregion in Southeast Asia, where drug-resistant malaria parasites are emerging and spreading. This research is expanding the range of mosquito species that are represented in our whole genome data.\n", + "\n", + "More information about this release can be found in the data resource website.\n", + "\n", + "This page provides an introduction to open data resources released as part of the first phase of the Vector Observatory-Asia Genomic Surveillance Project. These projects are known as `Adir1.0` and `Amin1.0` for short. We hope the data from these releases will be a valuable resource for research and surveillance of malaria vectors. This page covers the Amin1.0 Anopheles minimus data release. For more information about `Adir1.0`, please head to the `Adir1.0` data resource website.\n", + "\n", + "If you have any questions about this guide or how to use the data, please [start a new discussion](https://github.com/malariagen/vector-public-data/discussions/new) on the malariagen/vector-open-data repo on GitHub. If you find any bugs, please [raise an issue](https://github.com/malariagen/vector-public-data/issues/new/choose)." ] }, { @@ -225,10 +231,16 @@ "name": "Amin1.0-intro.ipynb", "provenance": [] }, + "environment": { + "kernel": "mgenv_v7.2.0", + "name": "workbench-notebooks.m134", + "type": "gcloud", + "uri": "us-docker.pkg.dev/deeplearning-platform-release/gcr.io/workbench-notebooks:m134" + }, "kernelspec": { - "display_name": "global-global-mgenv-6.0.6", + "display_name": "Python (mgenv_v7.2.0)", "language": "python", - "name": "conda-env-global-global-mgenv-6.0.6-py" + "name": "mgenv_v7.2.0" }, "language_info": { "codemirror_mode": { @@ -240,7 +252,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.12.7" + "version": "3.12.11" } }, "nbformat": 4,