Miniconda is a lightweight version of Anaconda that we recommend. To install it:
- Go to: https://docs.conda.io/en/latest/miniconda.html#latest-miniconda-installer-links
- Download the latest version for your OS.
- Follow the installer instructions.
Click through the installation steps and follow:
- Install for: All Users (requires admin privileges)
- Destination folder: C:\Miniconda3
- Advanced Options: Add Miniconda3 to the system PATH environment variable
- Advanced Options: Register Miniconda3 as the system Python 3.X These will make sure that Anaconda is easily accessible from most places on your computer.
wget -nc https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh && bash Miniconda3-latest-Linux-x86_64.sh -b && ~/miniconda3/bin/conda init bash
You can install Miniconda by using the GUI with the pkg file or run this command:
wget -nc https://repo.anaconda.com/miniconda/Miniconda3-latest-MacOSX-x86_64.sh && bash Miniconda3-latest-MacOSX-x86_64.sh -b && ~/miniconda3/bin/conda init zsh
conda create -y -n sleap -c sleap -c nvidia -c conda-forge sleap=1.2.6
git --version
If git is not installed please do so by following the instructions
Clone the repo by running
git clone https://github.com/talmolab/sleap && cd sleap
Install from the environment file
conda env create -f environment.yml -n sleap
Activating the environment
conda activate sleap
Openning the GUI
sleap-label
Official guide
Leo's Guide (for Windows)