Skip to content

Building index failure #81

@learniup

Description

@learniup

[lsx@macaca lobSTR_data]$ python scripts/lobstr_index.py --str lobSTR_region --ref CR_genome_chr_edition.fa --out output_directory
Traceback (most recent call last):
File "scripts/lobstr_index.py", line 216, in
if not DEBUG: GetRefFasta(genome, refkeys, merged_str_file, str_ref_fasta, str_map_file)
File "scripts/lobstr_index.py", line 149, in GetRefFasta
chrom, start, end, annot = line.strip().split("\t")
ValueError: need more than 1 value to unpack
How to address this issue? Do anyone meet this issue? I will appreciate if you help me. thank you!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions