I have 3000 samples of bam files to put in.

[wtfitis1]

This is the version that i used 'allelotype-4.0.6'.The align software that i used is bwa-mem.So when i put in too many(3048 samples) of bam files ,it will report an error which is 'result/res.allelotype.stats': Too many open files

But when i put 334 bam samples into it ,Lobstr could run.
The sample that I used is rice